RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 UBXN6Q9BZV1 441 aa4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 TMEM245Q9H330 911 aa4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 JPT2Q9H910 190 aa4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 PRMT8Q9NR22 394 aaPredicted RBP4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 GTSE1Q9NYZ3 720 aa4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 TRMT6Q9UJA5 497 aaKnown RBP4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 KLK13Q9UKR3 277 aa4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 DIMT1Q9UNQ2 313 aaKnown RBP4.53□□□□□ -1.68
SMARCE1-219ENST00000583294 FGD5Q6ZNL6 1462 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 SHISA9B4DS77 424 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 EEF2KO00418 725 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 ZNF18P17022 549 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 SLC1A6P48664 564 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 HNRNPFP52597 415 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 FASTKQ14296 549 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 GPAT3Q53EU6 434 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 TIPARPQ7Z3E1 657 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 GTSCR1Q86UQ5 136 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 ARL10Q8N8L6 244 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 ZNRF1Q8ND25 227 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 ICA1LQ8NDH6 482 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 GOLGA5Q8TBA6 731 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 URGCPQ8TCY9 931 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 CDHR1Q96JP9 859 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 RPGRIP1Q96KN7 1286 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 RUNDC3BQ96NL0 473 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 NAP1L3Q99457 506 aaPredicted RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 TEX13AQ9BXU3 409 aaPredicted RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 LRRCC1Q9C099 1032 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 CARD9Q9H257 536 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 SP140LQ9H930 580 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 NARFQ9UHQ1 456 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 MGAT4AQ9UM21 535 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 STRAPQ9Y3F4 350 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 STYXL1Q9Y6J8 313 aa4.52□□□□□ -1.69
SMARCE1-219ENST00000583294 BCAS2O75934 225 aaPredicted RBP4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 REC8O95072 547 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 IGHV3-13P01766 116 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 OR9G9P0C7N8 305 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 MBL2P11226 248 aaPredicted RBP4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 SLC1A4P43007 532 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 TKTL1P51854 596 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 SRP54P61011 504 aaKnown RBP4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 ACY1Q03154 408 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 POM121L1PQ3SYA9 428 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 ZNF841Q6ZN19 808 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 RABEPKQ7Z6M1 372 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 GVQW1Q8N7I0 195 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 CCNYQ8ND76 341 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 RASL10AQ92737 203 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 SLCO4A1Q96BD0 722 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 RAB39BQ96DA2 213 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 C16orf58Q96GQ5 468 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 COG3Q96JB2 828 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 GPR137Q96N19 417 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 JPH2Q9BR39 696 aaPredicted RBP4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 ADNPQ9H2P0 1102 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 NT5DC2Q9H857 520 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 EIF3KQ9UBQ5 218 aaKnown RBP4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 COPS7AQ9UBW8 275 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 FBXO7Q9Y3I1 522 aa4.51□□□□□ -1.69
SMARCE1-219ENST00000583294 TEX48A0A1B0GUV7 120 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 A0A1W2PPR1 153 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 RPL37AP8A6NKH3 93 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 ZBTB14O43829 449 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 SHC1P29353 583 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 ALDH3B1P43353 468 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 ACADSBP45954 432 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 GSK3BP49841 420 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 COX10Q12887 443 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 TSTA3Q13630 321 aaPredicted RBP4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 EXOSC7Q15024 291 aaKnown RBP4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 CMPK2Q5EBM0 449 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 C1orf189Q5VU69 101 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 NKAIN2Q5VXU1 208 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 CDC42EP5Q6NZY7 148 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 NUFIP2Q7Z417 695 aaKnown RBP4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 ZNF781Q8N8C0 355 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 CHDHQ8NE62 594 aaPredicted RBP4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 TMEM185AQ8NFB2 350 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 OR1K1Q8NGR3 316 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 EXOC6Q8TAG9 804 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 DDX47Q9H0S4 455 aaKnown RBP4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 GNB4Q9HAV0 340 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 FAM153AQ9UHL3 310 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 MOSPD1Q9UJG1 213 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 RARRES3Q9UL19 164 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 CPQQ9Y646 472 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 GON4LQ3T8J9 2241 aa4.5□□□□□ -1.69
SMARCE1-219ENST00000583294 TRBV2A0A0J9YWF9 115 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 MEI4A8MW99 385 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 ACADSP16219 412 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 LMO2P25791 158 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 MARCKSP29966 332 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 CASP9P55211 416 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 RPS4XP62701 263 aaKnown RBP4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 CCZ1BP86790 482 aa4.49□□□□□ -1.69
SMARCE1-219ENST00000583294 CCZ1P86791 482 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms