RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	ZDHHC23	Q8IYP9	409 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC25A41	Q8N5S1	370 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	TEX26	Q8N6G2	289 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	GPR26	Q8NDV2	337 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	EXD1	Q8NHP7	514 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	SPATA22	Q8NHS9	363 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	OSR1	Q8TAX0	266 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	ARRDC2	Q8TBH0	407 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	RAPGEF5	Q92565	580 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	SGCD	Q92629	289 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	CXorf40B	Q96DE9	158 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	OR6C1	Q96RD1	312 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	AP1M1	Q9BXS5	423 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	GOLPH3	Q9H4A6	298 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC6A13	Q9NSD5	602 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	OGFR	Q9NZT2	677 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	GIMAP2	Q9UG22	337 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	PILRA	Q9UKJ1	303 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	PSMD13	Q9UNM6	376 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	LAMP3	Q9UQV4	416 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	TP53TG5	Q9Y2B4	290 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	FAM96B	Q9Y3D0	163 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	KNTC1	P50748	2209 aa		4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	MN1	Q10571	1320 aa	Predicted RBP	4.15	□□□□□ -1.75
MSI2-213	ENST00000581523	COL6A6	A6NMZ7	2263 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523		A0A1W2PRQ8	180 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	DPPA5	A6NC42	116 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	GOLGA6L19	H0YKK7	550 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	POLR1C	O15160	346 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	MATN3	O15232	486 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	TP73	O15350	636 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC25A17	O43808	307 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	PROP1	O75360	226 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC25A14	O95258	325 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	PCNA	P12004	261 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	AMD1	P17707	334 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	TCN2	P20062	427 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CCNC	P24863	283 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	TEAD1	P28347	426 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	HNRNPH3	P31942	346 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CA5A	P35218	305 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	MLLT10	P55197	1068 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	UBASH3A	P57075	661 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	UBE2I	P63279	158 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	ZBED6	P86452	979 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	PPID	Q08752	370 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	PEX6	Q13608	980 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	GPR18	Q14330	331 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	NFE2L1	Q14494	772 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	PRR30	Q53SZ7	412 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	ODF2	Q5BJF6	829 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	ARMC3	Q5W041	872 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	HMBOX1	Q6NT76	420 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	IYD	Q6PHW0	289 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	WDR74	Q6RFH5	385 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	FAM151B	Q6UXP7	276 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CERS6	Q6ZMG9	384 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	GLT6D1	Q7Z4J2	308 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CCDC50	Q8IVM0	306 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNF547	Q8IVP9	402 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	VSTM4	Q8IW00	320 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	NKAIN3	Q8N8D7	197 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	IPMK	Q8NFU5	416 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	BLOC1S5	Q8TDH9	187 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	GLYATL1	Q969I3	302 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	FAF2	Q96CS3	445 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC45A3	Q96JT2	553 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	C9orf72	Q96LT7	481 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	BAG1	Q99933	345 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	FAM118B	Q9BPY3	351 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	MLPH	Q9BV36	600 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	TEX12	Q9BXU0	123 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	XPO4	Q9C0E2	1151 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CARD9	Q9H257	536 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	TSPY26P	Q9H489	355 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	IMP3	Q9NV31	184 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	VPS18	Q9P253	973 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	CTNNAL1	Q9UBT7	734 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	SLC23A2	Q9UGH3	650 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	DNPEP	Q9ULA0	475 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	MYRF	Q9Y2G1	1151 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	WDR37	Q9Y2I8	494 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	PPIL1	Q9Y3C6	166 aa		4.14	□□□□□ -1.75
MSI2-213	ENST00000581523	SETX	Q7Z333	2677 aa	Known RBP	4.14	□□□□□ -1.75
MSI2-213	ENST00000581523		A0A096LPK6	155 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	KIR2DS5	A0A0G2JLQ3	304 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523		A0A0G2JNG1	304 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	LILRA5	A6NI73	299 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	ANKRD66	B4E2M5	251 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	KIR2DS3	K7RE56	304 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	MASP2	O00187	686 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	RHOD	O00212	210 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	CCL22	O00626	93 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	HCRTR2	O43614	444 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	SPOP	O43791	374 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	NDUFS3	O75489	264 aa		4.13	□□□□□ -1.75
MSI2-213	ENST00000581523	KRT7	P08729	469 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms