RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 RIT1Q92963 219 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 MAGED4Q96JG8 741 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 TIMMDC1Q9NPL8 285 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 PPT2Q9UMR5 302 aa16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 ASH1LQ9NR48 2969 aaKnown RBP16.49■□□□□ 0.23
CTDNEP1-207ENST00000572043 KLRC4-KLRK1H3BQV0 150 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 CCL21O00585 134 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 TFECO14948 347 aaPredicted RBP16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 ASNA1O43681 348 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 GSTA1P08263 222 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 CHN1P15882 459 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 IMPDH1P20839 514 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 MAPK12P53778 367 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 PRKAA2P54646 552 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 RASA2Q15283 850 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 NDUFAF5Q5TEU4 345 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 MAMDC2Q7Z304 686 aaPredicted RBP16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 SLC22A9Q8IVM8 553 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 ST13P4Q8IZP2 240 aaPredicted RBP16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 MMP21Q8N119 569 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 METTL4Q8N3J2 472 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 CCNYL1Q8N7R7 359 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 PSD4Q8NDX1 1056 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 OR8K3Q8NH51 312 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 GAL3ST4Q96RP7 486 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 C12orf65Q9H3J6 166 aaKnown RBP16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 ANKZF1Q9H8Y5 726 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 DCDC2Q9UHG0 476 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 TINAGQ9UJW2 476 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 EMCNQ9ULC0 261 aa16.48■□□□□ 0.23
CTDNEP1-207ENST00000572043 A0A0G2JMM0 328 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 A0A1W2PPB8 328 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 A0A1W2PRS3 328 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 PINLYPA6NC86 204 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 KIR3DP1A8MWS1 328 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 MANBAO00462 879 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 HS6ST1O60243 411 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 CDC40O60508 579 aaKnown RBP eCLIP16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 GLRA3O75311 464 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 IGKV3-11P04433 115 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 PIK3R1P27986 724 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 TNFRSF8P28908 595 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 HMOX2P30519 316 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 HTR6P50406 440 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 GALNT1Q10472 559 aaPredicted RBP16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 C3AR1Q16581 482 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 KRTCAP3Q53RY4 240 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 C10orf62Q5T681 223 aaPredicted RBP16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 SCIMPQ6UWF3 145 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 GPALPP1Q8IXQ4 340 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 C1orf52Q8N6N3 182 aaKnown RBP16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 CCDC63Q8NA47 563 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 C7orf57Q8NEG2 295 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 MYRIPQ8NFW9 859 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 OR2W6PQ8NHA6 318 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 METTL6Q8TCB7 284 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 RELTQ969Z4 430 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 FBXL20Q96IG2 436 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 ART5Q96L15 291 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 KCNA7Q96RP8 456 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 ZNF382Q96SR6 550 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 PELOQ9BRX2 385 aaKnown RBP16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 DEPPQ9NTK1 212 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 ADAM29Q9UKF5 820 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 TIMM22Q9Y584 194 aa16.47■□□□□ 0.23
CTDNEP1-207ENST00000572043 ESPL1Q14674 2120 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 TLDC2A0PJX2 215 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 G3V2L1 256 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 PDE9AO76083 593 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 KRT6AP02538 564 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 KRT6BP04259 564 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 MYL2P10916 166 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 SSTR4P31391 388 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 PTGER1P34995 402 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 CA7P43166 264 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 KRT6CP48668 564 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 CASP6P55212 293 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 PLGLB1Q02325 96 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 TBL3Q12788 808 aaKnown RBP16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 BIKQ13323 160 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 RNF111Q6ZNA4 994 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 C4orf33Q8N1A6 199 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 GHDCQ8N2G8 530 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 OR4K14Q8NGD5 310 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 L3HYPDHQ96EM0 354 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 BRF2Q9HAW0 419 aa16.46■□□□□ 0.23
CTDNEP1-207ENST00000572043 FAM166BA8MTA8 275 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 PROCP04070 461 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 CT62P0C5K7 136 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 SLC35E2P0CK97 266 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 ABOP16442 354 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 NT5EP21589 574 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 ALDH9A1P49189 494 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 XKP51811 444 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 VSNL1P62760 191 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 HMGCS1Q01581 520 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 LCP2Q13094 533 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 SPRED3Q2MJR0 410 aa16.45■□□□□ 0.22
CTDNEP1-207ENST00000572043 PIGGQ5H8A4 983 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms