RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 IFT20Q8IY31 132 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 RHEBL1Q8TAI7 183 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 CMTM7Q96FZ5 175 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 UCK2Q9BZX2 261 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 ROGDIQ9GZN7 287 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 ACSS3Q9H6R3 686 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 RNF6Q9Y252 685 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 RNF11Q9Y3C5 154 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 TSC22D4Q9Y3Q8 395 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 FAM215AQ9Y5M1 114 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A096LPK6 155 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A1B0GTL3 188 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 LRRC3CA6NJW4 275 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 GLOD5A6NK44 160 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 NPIPA2E9PIF3 369 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 NPIPA3F8WFD2 350 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 OR7A17O14581 309 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 PROM1O43490 865 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 TOXO94900 526 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 LRATO95237 230 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 ACSL3O95573 720 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 IGHG3P01860 377 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 RFPL3SP0C7P2 107 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 TNNI3P19429 210 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 CNR1P21554 472 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 ELAVL4P26378 380 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 HPDP32754 393 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 PIGAP37287 484 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 MAGEA12P43365 314 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 NUP107P57740 925 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 UAP1Q16222 522 aaPredicted RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 RTL6Q6ICC9 239 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 ARHGAP11AQ6P4F7 1023 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 CHSY3Q70JA7 882 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 GPR180Q86V85 440 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 ZCCHC7Q8N3Z6 543 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 SRFBP1Q8NEF9 429 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 OR52B6Q8NGF0 335 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 WDR20Q8TBZ3 569 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 UBE2E3Q969T4 207 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 NSUN5Q96P11 429 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 CDK15Q96Q40 435 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 RPF2Q9H7B2 306 aaKnown RBP12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 MTORP42345 2549 aa12.78□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A087X1B8 175 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 FAM90A27PA6NNH2 459 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 H0YIV9 168 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 KLHL2O95198 593 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 AIFM1O95831 613 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 GBAP04062 536 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 SERPINB1P30740 379 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ALDH18A1P54886 795 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 HERVK_113P63132 956 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ERVK-8P63133 956 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 PLGLB1Q02325 96 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 GTF2H2Q13888 395 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 RCN2Q14257 317 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 PCBP2Q15366 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 CPSF6Q16630 551 aaKnown RBP eCLIP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 MPEG1Q2M385 716 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 HYAL4Q2M3T9 481 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 GTF2H2CQ6P1K8 395 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 RPS27LQ71UM5 84 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 L3MBTL4Q8NA19 623 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 GOLM1Q8NBJ4 401 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 OR5M9Q8NGP3 310 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 RGMAQ96B86 450 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 FBXL20Q96IG2 436 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 DGAT2Q96PD7 388 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 FAM173AQ9BQD7 235 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 CNPPD1Q9BV87 410 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ERVK-6Q9BXR3 956 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 FUT8Q9BYC5 575 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 TP63Q9H3D4 680 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 DDX31Q9H8H2 851 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ACTR8Q9H981 624 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ZBTB26Q9HCK0 441 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 SPRR3Q9UBC9 169 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ERVK-19Q9WJR5 959 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.37
GTF3C1-211ENST00000569653 ANKHD1Q8IWZ3 2542 aaKnown RBP12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 A0A1B0GVC2 190 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 PGRMC2O15173 223 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 INHBAP08476 426 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 SBK3P0C264 359 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 CT62P0C5K7 136 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 RHOXF2BP0C7M4 288 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 GFAPP14136 432 aa12.76□□□□□ -0.37
GTF3C1-211ENST00000569653 ALOX15P16050 662 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms