RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 PACS2Q86VP3 889 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 TRIM42Q8IWZ5 723 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 MUC15Q8N387 334 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 ZNF321PQ8N8H1 164 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 TC2NQ8N9U0 490 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 FAM13CQ8NE31 585 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 OR14A16Q8NHC5 309 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 GSDMBQ8TAX9 411 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 DIO2Q92813 273 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 CCT8L2Q96SF2 557 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 BPESC1Q9GZL8 116 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 RNF122Q9H9V4 155 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 MYOZ1Q9NP98 299 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 ACSS1Q9NUB1 689 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 NLE1Q9NVX2 485 aaPredicted RBP5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 WWOXQ9NZC7 414 aa5.9□□□□□ -1.46
HERPUD1-217ENST00000569429 ARHGAP32A7KAX9 2087 aa5.9□□□□□ -1.47
HERPUD1-217ENST00000569429 IQCF5A8MTL0 148 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 TMCO5BA8MYB1 307 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 SMAPO00193 183 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 TIMM23O14925 209 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 LCMT2O60294 686 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 CEP104O60308 925 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 RAMP1O60894 148 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 LRATO95237 230 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 B3GALT4O96024 378 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 ALDOAP04075 364 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 TACSTD2P09758 323 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 NUDT17P0C025 328 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 PSMA3P25788 255 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 APEX1P27695 318 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 IL2RGP31785 369 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 DEKP35659 375 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 COILP38432 576 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 MASP1P48740 699 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 STARP49675 285 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 CHN2P52757 468 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 CDH11P55287 796 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 GFRA1P56159 465 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 PWP1Q13610 501 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 RUSC1-AS1Q66K80 236 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 SLC9A4Q6AI14 798 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 TIGD3Q6B0B8 471 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 ALKBH2Q6NS38 261 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 RHOUQ7L0Q8 258 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 FAM214BQ7L5A3 538 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 PID1Q7Z2X4 250 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 ATG4DQ86TL0 474 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 LRRC56Q8IYG6 542 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 TEX29Q8N6K0 151 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 STEAP2Q8NFT2 490 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 PIWIL2Q8TC59 973 aaKnown RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 PTPMT1Q8WUK0 201 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 SKA2Q8WVK7 121 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 UBE2FQ969M7 185 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 TMEM41AQ96HV5 264 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 RILPQ96NA2 401 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 VAT1Q99536 393 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 DHRS9Q9BPW9 319 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 SYT11Q9BT88 431 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 OR8D2Q9GZM6 311 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 PRTFDC1Q9NRG1 225 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 KLHL8Q9P2G9 620 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 SAE1Q9UBE0 346 aaPredicted RBP5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 VTI1BQ9UEU0 232 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 IP6K2Q9UHH9 426 aa5.89□□□□□ -1.47
HERPUD1-217ENST00000569429 DOCK11Q5JSL3 2073 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 ZNF487B1APH4 448 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 B4DSR2 109 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 E7EQL1 145 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 TP53I11O14683 189 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 LILRA1O75019 489 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 ANXA9O76027 345 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 BCL10O95999 233 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 FTLP02792 175 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 PRB2P02812 416 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 ZNF888P0CJ79 500 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 SMIM10L1P0DMW3 83 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 GZMAP12544 262 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 BMP4P12644 408 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 IL11P20809 199 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 PRTN3P24158 256 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 GRK3P35626 688 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 ANP32AP39687 249 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 GEMP55040 296 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 SLC13A2Q13183 592 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 RPS6KA1Q15418 735 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 TAB1Q15750 504 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 BCL2A1Q16548 175 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 CTU2Q2VPK5 515 aaKnown RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 AAGABQ6PD74 315 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 CCBE1Q6UXH8 406 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 NPNTQ6UXI9 565 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 BEND4Q6ZU67 534 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 CHMP1BQ7LBR1 199 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 GLCCI1Q86VQ1 547 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 CDKL3Q8IVW4 592 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 RCOR2Q8IZ40 523 aa5.88□□□□□ -1.47
HERPUD1-217ENST00000569429 ZNF567Q8N184 647 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms