RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 TRIM63Q969Q1 353 aa20.49■□□□□ 0.87
DENND4A-208ENST00000568515 WDR34Q96EX3 536 aa20.49■□□□□ 0.87
DENND4A-208ENST00000568515 RERGLQ9H628 205 aa20.49■□□□□ 0.87
DENND4A-208ENST00000568515 TVP23BQ9NYZ1 205 aa20.49■□□□□ 0.87
DENND4A-208ENST00000568515 TAAR2Q9P1P5 351 aa20.49■□□□□ 0.87
DENND4A-208ENST00000568515 DIMT1Q9UNQ2 313 aaKnown RBP20.49■□□□□ 0.87
DENND4A-208ENST00000568515 POLR1CO15160 346 aaPredicted RBP20.48■□□□□ 0.87
DENND4A-208ENST00000568515 GPC1P35052 558 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 SLC9A3P48764 834 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 DCDC1P59894 354 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 CCDC58Q4VC31 144 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 FAM180BQ6P0A1 224 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 TNFAIP8L2Q6P589 184 aaPredicted RBP20.48■□□□□ 0.87
DENND4A-208ENST00000568515 Q6ZVU0 165 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 CAMKK1Q8N5S9 505 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 TRAM1L1Q8N609 369 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 HORMAD2Q8N7B1 307 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 OR52I1Q8NGK6 324 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 TMEM169Q96HH4 297 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 DHRS1Q96LJ7 313 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 DYRK1BQ9Y463 629 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 TLX2O43763 284 aaPredicted RBP20.48■□□□□ 0.87
DENND4A-208ENST00000568515 CKMP06732 381 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 CHRM5P08912 532 aaPredicted RBP20.48■□□□□ 0.87
DENND4A-208ENST00000568515 TNNI3P19429 210 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 VIPR1P32241 457 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.48■□□□□ 0.873e-9■■■■■ 40.3
DENND4A-208ENST00000568515 PPP2R2DQ66LE6 453 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 LMNTD1Q8N9Z9 388 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 JPH3Q8WXH2 748 aaPredicted RBP20.48■□□□□ 0.87
DENND4A-208ENST00000568515 IGSF21Q96ID5 467 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 TEFMQ96QE5 360 aaKnown RBP20.48■□□□□ 0.87
DENND4A-208ENST00000568515 MIEF1Q9NQG6 463 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 ACOXLQ9NUZ1 547 aa20.48■□□□□ 0.87
DENND4A-208ENST00000568515 PRKYO43930 277 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 CTSAP10619 480 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 SDC2P34741 201 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 ETV5P41161 510 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 ETV1P50549 477 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 BNC1Q01954 994 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 MEF2AQ02078 507 aaPredicted RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 TARDBPQ13148 414 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■■■□ 25.7
DENND4A-208ENST00000568515 QPRTQ15274 297 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 FLYWCH1Q4VC44 716 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 HENMT1Q5T8I9 393 aaKnown RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 HIST2H2AA3Q6FI13 130 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 TMIGD1Q6UXZ0 262 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 DEF8Q6ZN54 512 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 RBM45Q8IUH3 476 aaKnown RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 FAM26EQ8N5C1 309 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 IQCF1Q8N6M8 205 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 KIAA1143Q96AT1 154 aaPredicted RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 TMEM19Q96HH6 336 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 RAB36O95755 333 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 CYP2A6P11509 494 aaPredicted RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 HLA-DMAP28067 261 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 PBLDP30039 288 aaPredicted RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 SSTR4P31391 388 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 ATAT1Q5SQI0 421 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 ENKURQ8TC29 256 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 KCTD7Q96MP8 289 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 A4GALTQ9NPC4 353 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 SLC25A13Q9UJS0 675 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 ICKQ9UPZ9 632 aa20.47■□□□□ 0.87
DENND4A-208ENST00000568515 SPIN1Q9Y657 262 aaPredicted RBP20.47■□□□□ 0.87
DENND4A-208ENST00000568515 CASP8AP2Q9UKL3 1982 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 AGRPO00253 132 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 C1orf105O95561 183 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 TP53P04637 393 aaPredicted RBP20.46■□□□□ 0.87
DENND4A-208ENST00000568515 URODP06132 367 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 DDX53Q86TM3 631 aaKnown RBP20.46■□□□□ 0.87
DENND4A-208ENST00000568515 SPNS1Q9H2V7 528 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 CXorf51AA0A1B0GTR3 108 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 OR6C70A6NIJ9 312 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 MAPK9P45984 424 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 PRLHRP49683 370 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 CCL23P55773 120 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 MADCAM1Q13477 382 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 LAPTM4BQ86VI4 370 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 OR4D11Q8NGI4 311 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 MED18Q9BUE0 208 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 ZSCAN5AQ9BUG6 496 aa20.46■□□□□ 0.87
DENND4A-208ENST00000568515 MRPL17Q9NRX2 175 aaKnown RBP20.46■□□□□ 0.87
DENND4A-208ENST00000568515 TESQ9UGI8 421 aaKnown RBP20.46■□□□□ 0.87
DENND4A-208ENST00000568515 YARS2Q9Y2Z4 477 aaKnown RBP20.46■□□□□ 0.87
DENND4A-208ENST00000568515 THSD7BQ9C0I4 1608 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 SMIM30A4D0T7 59 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 ANKDD1BA6NHY2 528 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 PITPNM1O00562 1244 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 ARPC4P59998 168 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 ZNF628Q5EBL2 1059 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 IKBIPQ70UQ0 350 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 TCTE3Q8IZS6 198 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 SLC43A3Q8NBI5 491 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 SLC7A13Q8TCU3 470 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 NEURL3Q96EH8 262 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 POLDIP3Q9BY77 421 aaKnown RBP20.45■□□□□ 0.86
DENND4A-208ENST00000568515 ANKRA2Q9H9E1 313 aa20.45■□□□□ 0.86
DENND4A-208ENST00000568515 SEMA3GQ9NS98 782 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms