RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TMEM185AQ8NFB2 350 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 GOLGA5Q8TBA6 731 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 TCP11Q8WWU5 503 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 NABP1Q96AH0 204 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 RAB39BQ96DA2 213 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 RPGRIP1Q96KN7 1286 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 ZNF597Q96LX8 424 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 GPR137Q96N19 417 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 RUNDC3BQ96NL0 473 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 RCHY1Q96PM5 261 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 STRADBQ9C0K7 418 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 SYTL2Q9HCH5 934 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 DEPPQ9NTK1 212 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 COPS7AQ9UBW8 275 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 FAM153AQ9UHL3 310 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 NARFQ9UHQ1 456 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 TSPAN16Q9UKR8 245 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 RPH3AQ9Y2J0 694 aaPredicted RBP3.65□□□□□ -1.83
CHD9-215ENST00000565442 PRSS21Q9Y6M0 314 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 FGD5Q6ZNL6 1462 aa3.65□□□□□ -1.83
CHD9-215ENST00000565442 SPAG9O60271 1321 aaKnown RBP3.65□□□□□ -1.83
CHD9-215ENST00000565442 IGHV3OR16-10A0A075B7F0 116 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 TRGV8A0A0C4DH27 118 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 TRBV5-4A0A0C4DH59 114 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 ZNF724A8MTY0 619 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 PDHXO00330 501 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 DUSP11O75319 330 aaKnown RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 REC8O95072 547 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 MARCKSP29966 332 aaPredicted RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 TNFRSF4P43489 277 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 TKTL1P51854 596 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 SRPXP78539 464 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 CCZ1BP86790 482 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 CCZ1P86791 482 aaPredicted RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 WASHC5Q12768 1159 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 ITPK1Q13572 414 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 SLC17A1Q14916 467 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 EXOSC7Q15024 291 aaKnown RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 CMPK2Q5EBM0 449 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 CDC42EP5Q6NZY7 148 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 CDHR3Q6ZTQ4 885 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 STXBP4Q6ZWJ1 553 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 C1orf186Q6ZWK4 172 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 BATF2Q8N1L9 274 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 GPATCH11Q8N954 259 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 BANPQ8N9N5 519 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 NPRL2Q8WTW4 380 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 COG3Q96JB2 828 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 ANKRD27Q96NW4 1050 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 TAAR6Q96RI8 345 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 ZNF577Q9BSK1 485 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 CHCHD5Q9BSY4 110 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 XPO4Q9C0E2 1151 aaKnown RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 TRPV6Q9H1D0 765 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 LIME1Q9H400 295 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 MOB1AQ9H8S9 216 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 SLC25A19Q9HC21 320 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 TRIM10Q9UDY6 481 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 ZNF346Q9UL40 294 aaKnown RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 MRPS2Q9Y399 296 aaKnown RBP3.64□□□□□ -1.83
CHD9-215ENST00000565442 MOB4Q9Y3A3 225 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 RPGRIP1LQ68CZ1 1315 aa3.64□□□□□ -1.83
CHD9-215ENST00000565442 GPRASP1Q5JY77 1395 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 K7EQG2 157 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 OR6B1O95007 311 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ALPPP05187 535 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ALPPL2P10696 532 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 MBL2P11226 248 aaPredicted RBP3.63□□□□□ -1.83
CHD9-215ENST00000565442 PPP2R1AP30153 589 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ETV5P41161 510 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ALDH3B1P43353 468 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ACADSBP45954 432 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 NLRP11P59045 1033 aaKnown RBP3.63□□□□□ -1.83
CHD9-215ENST00000565442 MS4A2Q01362 244 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 PDK1Q15118 436 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 CARTPTQ16568 116 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 MUC21Q5SSG8 566 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ZNF343Q6P1L6 599 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 TATDN1Q6P1N9 297 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 PAQR6Q6TCH4 344 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 BNIPLQ7Z465 357 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 RNF130Q86XS8 419 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 GVQW1Q8N7I0 195 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ZNRF1Q8ND25 227 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ICA1LQ8NDH6 482 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 OR8H1Q8NGG4 311 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 KIAA1524Q8TCG1 905 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 SLC13A3Q8WWT9 602 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 CDHR1Q96JP9 859 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 RBM4BQ9BQ04 359 aaKnown RBP3.63□□□□□ -1.83
CHD9-215ENST00000565442 CCDC28BQ9BUN5 200 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 TNMDQ9H2S6 317 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 TUBB1Q9H4B7 451 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 THYN1Q9P016 225 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 VPS54Q9P1Q0 977 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 ERVK-18Q9QC07 812 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 CTSZQ9UBR2 303 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 AUP1Q9Y679 476 aa3.63□□□□□ -1.83
CHD9-215ENST00000565442 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms