RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ATP6AP2A0A1C7CYW4 349 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 TGFBR3LH3BV60 316 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 KLF11O14901 512 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 LSM1O15116 133 aaKnown RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 DPM1O60762 260 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 ATP6AP2O75787 350 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 ITGAMP11215 1152 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 PORP16435 677 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 CSNK2A2P19784 350 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 RPL38P63173 70 aaKnown RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 IGLV3-21P80748 117 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 MAD2L1Q13257 205 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 KIAA0040Q15053 153 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 PDCD2Q16342 344 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 RFTN2Q52LD8 501 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 ABHD17BQ5VST6 288 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 SLC5A8Q8N695 610 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 SIRT6Q8N6T7 355 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 OR2T11Q8NH01 316 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 BRIX1Q8TDN6 353 aaKnown RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 PTPMT1Q8WUK0 201 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 RIT1Q92963 219 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 UCN3Q969E3 161 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 PPWD1Q96BP3 646 aaKnown RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 KLHL29Q96CT2 875 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 C19orf60Q96EN9 201 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 C11orf24Q96F05 449 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 VMP1Q96GC9 406 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 ART5Q96L15 291 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF354BQ96LW1 612 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 OR8D2Q9GZM6 311 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 MIEF1Q9NQG6 463 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 PNPOQ9NVS9 261 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 ABI3Q9P2A4 366 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 COPS7AQ9UBW8 275 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 HAO1Q9UJM8 370 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 UTS2RQ9UKP6 389 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 EIF3LQ9Y262 564 aaKnown RBP14.93□□□□□ -0.02
RAB40C-208ENST00000564703 CLDN16Q9Y5I7 305 aa14.93□□□□□ -0.02
RAB40C-208ENST00000564703 DYTNA2CJ06 578 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 TRPC5OSA6NMA1 111 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 VPS4BO75351 444 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 CELA2AP08217 269 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 KITP10721 976 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 NR1D1P20393 614 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 GALNSP34059 522 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 NFATC3Q12968 1075 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 SOWAHCQ53LP3 525 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-208ENST00000564703 LINC00696Q6ZRV3 163 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 IKBIPQ70UQ0 350 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 CRLF3Q8IUI8 442 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 ARFGAP2Q8N6H7 521 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 FNDC5Q8NAU1 212 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 NFAM1Q8NET5 270 aaPredicted RBP14.92□□□□□ -0.02
RAB40C-208ENST00000564703 PPP1R36Q96LQ0 422 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 C3orf30Q96M34 536 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 MYNNQ9NPC7 610 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 MED4Q9NPJ6 270 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 PCSK5Q92824 1860 aa14.92□□□□□ -0.02
RAB40C-208ENST00000564703 ZFHX4Q86UP3 3567 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 HDAC3O15379 428 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 SNNO75324 88 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 ZFAND5O76080 213 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 PRPS2P11908 318 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 CPMP14384 443 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 DDX5P17844 614 aaKnown RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 DDCP20711 480 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 NT5EP21589 574 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 MPIP34949 423 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 FEN1P39748 380 aaKnown RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 ASMTP46597 345 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 MFAP5Q13361 173 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 ZNF267Q14586 743 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 MEP1AQ16819 746 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 XKR7Q5GH72 579 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 C6orf136Q5SQH8 315 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 RPS19BP1Q86WX3 136 aaKnown RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 ELP5Q8TE02 316 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 PSMF1Q92530 271 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 NCLNQ969V3 563 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 EXOSC8Q96B26 276 aaKnown RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 SENP5Q96HI0 755 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 BBC3Q96PG8 261 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 NUF2Q9BZD4 464 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 EHD3Q9NZN3 535 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 HEY2Q9UBP5 337 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 RALYQ9UKM9 306 aaKnown RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 CES1P1Q9UKY3 287 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 PPIEQ9UNP9 301 aaKnown RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 ENTPD4Q9Y227 616 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 HEMK1Q9Y5R4 338 aaPredicted RBP14.91□□□□□ -0.02
RAB40C-208ENST00000564703 CFAP47Q6ZTR5 3102 aa14.91□□□□□ -0.02
RAB40C-208ENST00000564703 ITPR1Q14643 2758 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 PIEZO2Q9H5I5 2752 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 FAM208BQ5VWN6 2430 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 TRBV11-1A0A0K0K1C0 115 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 K7EM74 188 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 HK2P52789 917 aa14.9□□□□□ -0.02
RAB40C-208ENST00000564703 OCRLQ01968 901 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms