RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ASIC3Q9UHC3 531 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 BOKQ9UMX3 212 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 ERVK-19Q9WJR5 959 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 OARD1Q9Y530 152 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 WIF1Q9Y5W5 379 aa10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 CHCHD2Q9Y6H1 151 aaPredicted RBP10.72□□□□□ -0.69
NSMCE1-202ENST00000561960 INAFM1C9JVW0 142 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 GNB5O14775 395 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 CCNT2O60583 730 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 NID1P14543 1247 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 GABRA1P14867 456 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 FOSL1P15407 271 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 ATP5A1P25705 553 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 SSR2P43308 183 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 SLC6A12P48065 614 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 TAS2R39P59534 338 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 SRYQ05066 204 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 CRYZQ08257 329 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 ZNF267Q14586 743 aaPredicted RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 FASTKD3Q14CZ7 662 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 NNATQ16517 81 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 HYAL4Q2M3T9 481 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 WIPI1Q5MNZ9 446 aaPredicted RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 YRDCQ86U90 279 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 GPSM1Q86YR5 675 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 CNTN4Q8IWV2 1026 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 GCNT2Q8N0V5 402 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 KRT78Q8N1N4 520 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 FBXW8Q8N3Y1 598 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 ACOT4Q8N9L9 421 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 OR5L2Q8NGL0 311 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 SLC44A1Q8WWI5 657 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 DIO2Q92813 273 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 MBD6Q96DN6 1003 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 Q96MF0 132 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 TIMP4Q99727 224 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 OR51B5Q9H339 312 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 CLK4Q9HAZ1 481 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 NEUROD4Q9HD90 331 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 SH2D2AQ9NP31 389 aa10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 C6orf203Q9P0P8 240 aaPredicted RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 MTRF1LQ9UGC7 380 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 CNOT11Q9UKZ1 510 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-202ENST00000561960 PCNX3Q9H6A9 2034 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 ATRQ13535 2644 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 A0A088AWK7 358 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 PHGDHO43175 533 aaKnown RBP10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 CLEC3AO75596 197 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 IL2RAP01589 272 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 GBAP04062 536 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 HRGP04196 525 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 HEXAP06865 529 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 EPXP11678 715 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 ZNF10P21506 573 aaPredicted RBP10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 SSTR4P31391 388 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 CEACAM8P31997 349 aaPredicted RBP10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 CPOXP36551 454 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 SLCO1A2P46721 670 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 OR4D1Q15615 310 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 FAM219BQ5XKK7 198 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 CAMKMTQ7Z624 323 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 LRRC25Q8N386 305 aaPredicted RBP10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 RDH11Q8TC12 318 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 SLC22A8Q8TCC7 542 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 PAQR8Q8TEZ7 354 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 PERPQ96FX8 193 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 ZNF597Q96LX8 424 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 RILPQ96NA2 401 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 KRT12Q99456 494 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 WWTR1Q9GZV5 400 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 UBTD1Q9HAC8 227 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 DNAJC11Q9NVH1 559 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 GALNT8Q9NY28 637 aa10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 SONP18583 2426 aaKnown RBP10.7□□□□□ -0.7
NSMCE1-202ENST00000561960 CHD3Q12873 2000 aaKnown RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 DNALI1O14645 258 aaPredicted RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 SNPHO15079 494 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 EPPINO95925 133 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 CLPSP04118 112 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 IGKV3-11P04433 115 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 COX7A2P14406 83 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 EPORP19235 508 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 STT3AP46977 705 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 CPA2P48052 419 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 KCNC1P48547 511 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 MASP1P48740 699 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 HNRNPH2P55795 449 aaKnown RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 SLAMF1Q13291 335 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 EFTUD2Q15029 972 aaKnown RBP eCLIP10.69□□□□□ -0.73e-6■■■■■ 41.9
NSMCE1-202ENST00000561960 DAZAP2Q15038 168 aaPredicted RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 TGFBIQ15582 683 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 ADPRMQ3LIE5 342 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 ZC3HC1Q86WB0 502 aaKnown RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 CXorf67Q86X51 503 aaPredicted RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 P3H2Q8IVL5 708 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 RASGEF1CQ8N431 466 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 GABPB2Q8TAK5 448 aaPredicted RBP10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 KCNC2Q96PR1 638 aa10.69□□□□□ -0.7
NSMCE1-202ENST00000561960 RBM24Q9BX46 236 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms