RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 C9orf40Q8IXQ3 194 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 FAM109AQ8N4B1 249 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 RPRMLQ8N4K4 120 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 LILRB4Q8NHJ6 448 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 REPS1Q96D71 796 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 FBXL20Q96IG2 436 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 DDX31Q9H8H2 851 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 IPPKQ9H8X2 491 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 RNF6Q9Y252 685 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 ASB4Q9Y574 426 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 TNPO3Q9Y5L0 923 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
SNX1-213ENST00000561026 A0A0A6YYD5 115 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 A0A1B0GVC2 190 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 WASHC1A8K0Z3 465 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 EEDO75530 441 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 PRKRAO75569 313 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 GPR75O95800 540 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 ALDOAP04075 364 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 TYK2P29597 1187 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 BSGP35613 385 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 BUD31P41223 144 aaPredicted RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 MAGEA5P43359 124 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 DNASE1L1P49184 302 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 PHEXP78562 749 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 PMPCAQ10713 525 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 UAP1Q16222 522 aaPredicted RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 MRM1Q6IN84 353 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 METTL2BQ6P1Q9 378 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 KLC3Q6P597 504 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 MEX3BQ6ZN04 569 aaKnown RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 TRILQ7L0X0 811 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 GOLGA7Q7Z5G4 137 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 ST13P4Q8IZP2 240 aaPredicted RBP14.98□□□□□ -0.01
SNX1-213ENST00000561026 SLC15A4Q8N697 577 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 L3MBTL4Q8NA19 623 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 SLC22A8Q8TCC7 542 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 CHTF18Q8WVB6 975 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 ART5Q96L15 291 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 SMC6Q96SB8 1091 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 LRRC1Q9BTT6 524 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 SH2D2AQ9NP31 389 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 PNPLA3Q9NST1 481 aa14.98□□□□□ -0.01
SNX1-213ENST00000561026 A0A1W2PR48 441 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 FOXE1O00358 373 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 BCKDKO14874 412 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 TMPRSS11DO60235 418 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 SIX3O95343 332 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 NADKO95544 446 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 POU3F2P20265 443 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 PIGAP37287 484 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 PIK3CGP48736 1102 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 SERPINB8P50452 374 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 NEK2P51955 445 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 KRTAP10-9P60411 292 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 SLC10A1Q14973 349 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 SLC22A10Q63ZE4 541 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 C8orf74Q6P047 294 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 LYPD8Q6UX82 237 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 ACAD11Q709F0 780 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 OR5M9Q8NGP3 310 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 OR5M3Q8NGP4 307 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 WDR20Q8TBZ3 569 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 DOK4Q8TEW6 326 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 SPACA9Q96E40 222 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 PELOQ9BRX2 385 aaKnown RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 CNPPD1Q9BV87 410 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 UCK2Q9BZX2 261 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 ACSS3Q9H6R3 686 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 SEMA4BQ9NPR2 832 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNX1-213ENST00000561026 LYARQ9NX58 379 aaKnown RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 TUBA8Q9NY65 449 aaPredicted RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 CPSF2Q9P2I0 782 aaKnown RBP14.97□□□□□ -0.01
SNX1-213ENST00000561026 RNF11Q9Y3C5 154 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 LIPGQ9Y5X9 500 aa14.97□□□□□ -0.01
SNX1-213ENST00000561026 CELSR1Q9NYQ6 3014 aa14.96□□□□□ -0.01
SNX1-213ENST00000561026 EML6Q6ZMW3 1958 aa14.96□□□□□ -0.01
SNX1-213ENST00000561026 IQANK1A0A1B0GTG1 560 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ATP6AP2A0A1C7CYW4 349 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 GLOD5A6NK44 160 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 SUSD5O60279 629 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 OR10H2O60403 315 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ATP6AP2O75787 350 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 TOXO94900 526 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 CELA3AP09093 270 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 FAM58BPP0C7Q3 252 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 NR2F6P10588 404 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 IGFBP2P18065 325 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 CAPN3P20807 821 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ACVR2AP27037 513 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 PHBP35232 272 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 NUP107P57740 925 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 HERVK_113P63132 956 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 ERVK-8P63133 956 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 CKAP4Q07065 602 aaKnown RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 TFF3Q07654 80 aa14.96□□□□□ -0.02
SNX1-213ENST00000561026 TBL3Q12788 808 aaKnown RBP14.96□□□□□ -0.02
SNX1-213ENST00000561026 ZNF267Q14586 743 aaPredicted RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms