RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 C1orf109Q9NX04 203 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM208BQ5VWN6 2430 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 A0A1W2PR48 441 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 DPM1O60762 260 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 GPR75O95800 540 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 DDX5P17844 614 aaKnown RBP13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 RPL14P50914 215 aaKnown RBP13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 HK2P52789 917 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 SLC26A5P58743 744 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 CHAF1BQ13112 559 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 BTBD16Q32M84 506 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 UGT3A2Q3SY77 523 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 IGFL3Q6UXB1 125 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 ASRGL1Q7L266 308 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 ZNF781Q8N8C0 355 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 MORN4Q8NDC4 146 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 B3GNT7Q8NFL0 401 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 RBM18Q96H35 190 aaKnown RBP13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 LMF1Q96S06 567 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 EBF4Q9BQW3 602 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 ALOXE3Q9BYJ1 711 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 EPS8L2Q9H6S3 715 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 ZNF552Q9H707 407 aaPredicted RBP13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 SAR1AQ9NR31 198 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 CCL27Q9Y4X3 112 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 CLDN16Q9Y5I7 305 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 CLCA3PQ9Y6N3 262 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 CAPN7Q9Y6W3 813 aa13.09□□□□□ -0.31
PKNOX1-209ENST00000560448 GNG14A0A1W2PPG7 69 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 FCHO1O14526 889 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 ATP5HO75947 161 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 DNAJB5O75953 348 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 UNC5CO95185 931 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 AIFM1O95831 613 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 PIK3R1P27986 724 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 MAPK1P28482 360 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 STT3AP46977 705 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 IDH3AP50213 366 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 FOLH1Q04609 750 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC48A1Q6P1K1 146 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 EPGNQ6UW88 154 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 IGFL2Q6UWQ7 119 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 ISLR2Q6UXK2 745 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 DDIASQ8IXT1 998 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC5A8Q8N695 610 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 TMEM52Q8NDY8 209 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 OR8K3Q8NH51 312 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 DNAJB14Q8TBM8 379 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 ELP5Q8TE02 316 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 PCSK5Q92824 1860 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 ANKRD9Q96BM1 317 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 VMP1Q96GC9 406 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 APIPQ96GX9 242 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 ZNF764Q96H86 408 aaPredicted RBP13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 DGAT2Q96PD7 388 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 RNF32Q9H0A6 362 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 TNFRSF12AQ9NP84 129 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 ABI3Q9P2A4 366 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 PCDHA9Q9Y5H5 950 aa13.08□□□□□ -0.32
PKNOX1-209ENST00000560448 LSM1O15116 133 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 FGF17O60258 216 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 VPS4BO75351 444 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 IFNA16P05015 189 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 ANXA4P09525 319 aaPredicted RBP13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 SLC35E2P0CK97 266 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 CLCN2P51788 898 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 KRT72Q14CN4 511 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 KIAA0040Q15053 153 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 NR6A1Q15406 480 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 XKR7Q5GH72 579 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 C18orf63Q68DL7 685 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 H3F3CQ6NXT2 135 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 Q6ZSR9 355 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 ASB18Q6ZVZ8 466 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 ARMC10Q8N2F6 343 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 OR4K14Q8NGD5 310 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 TM4SF18Q96CE8 201 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 C19orf60Q96EN9 201 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 FCRL1Q96LA6 429 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 NMUR2Q9GZQ4 415 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 MYNNQ9NPC7 610 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 TEX10Q9NXF1 929 aaPredicted RBP13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 ZDHHC2Q9UIJ5 367 aa13.07□□□□□ -0.32
PKNOX1-209ENST00000560448 MED13Q9UHV7 2174 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms