RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SPRED3Q2MJR0 410 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 COQ5Q5HYK3 327 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 FAM198BQ6UWH4 519 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 OVCH1Q7RTY7 1134 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 ZNF551Q7Z340 670 aaPredicted RBP9.8□□□□□ -0.84
TPM1-221ENST00000559831 DHDDSQ86SQ9 333 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 CCDC116Q8IYX3 515 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 NATD1Q8N6N6 113 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 ZFP28Q8NHY6 868 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 FBXO27Q8NI29 283 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 STT3BQ8TCJ2 826 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 DOK4Q8TEW6 326 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 GTF2H4Q92759 462 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 TSLPQ969D9 159 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 ANKRD9Q96BM1 317 aaPredicted RBP9.8□□□□□ -0.84
TPM1-221ENST00000559831 ZBED6CLQ96FA7 236 aaPredicted RBP9.8□□□□□ -0.84
TPM1-221ENST00000559831 PTCHD1Q96NR3 888 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 PANX1Q96RD7 426 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 DPH2Q9BQC3 489 aaPredicted RBP9.8□□□□□ -0.84
TPM1-221ENST00000559831 GLIPR2Q9H4G4 154 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 C14orf105Q9NVL8 296 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.8□□□□□ -0.84
TPM1-221ENST00000559831 GID8Q9NWU2 228 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 TAS2R7Q9NYW3 318 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.8□□□□□ -0.84
TPM1-221ENST00000559831 BTNL2Q9UIR0 455 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 PCDHGB4Q9UN71 923 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 MMACHCQ9Y4U1 282 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 PCDHGA8Q9Y5G5 932 aa9.8□□□□□ -0.84
TPM1-221ENST00000559831 A0A096LPI6 279 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 MYO1GB0I1T2 1018 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 TGFBR3LH3BV60 316 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 OR10H2O60403 315 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SCN2BO60939 215 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 CNOT3O75175 753 aaKnown RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 UNC5CO95185 931 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 ONECUT2O95948 504 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 IFNA16P05015 189 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 HEXBP07686 556 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 PORP16435 677 aaPredicted RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 NT5EP21589 574 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 MPIP34949 423 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 CDKN2CP42773 168 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 CDK9P50750 372 aaKnown RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 HSD17B7P56937 341 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 HBA1P69905 142 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SLC25A3Q00325 362 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 RHAGQ02094 409 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 LRRC74AQ0VAA2 488 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 LTB4RQ15722 352 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 NKG7Q16617 165 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 TRMT5Q32P41 509 aaKnown RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 SPDYE7PQ495Y7 208 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 GTDC1Q4AE62 458 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 FAAH2Q6GMR7 532 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 QSOX2Q6ZRP7 698 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 ZNF621Q6ZSS3 439 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 TIPARPQ7Z3E1 657 aaKnown RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 SZRD1Q7Z422 152 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 LAPTM4BQ86VI4 370 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SCUBE1Q8IWY4 988 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SAMD14Q8IZD0 417 aaPredicted RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 LRRC25Q8N386 305 aaPredicted RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 DPP10Q8N608 796 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 RBM15BQ8NDT2 890 aaKnown RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 ADCY4Q8NFM4 1077 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 OR9A2Q8NGT5 310 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 CT55Q8WUE5 264 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 OR5P2Q8WZ92 322 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 FKBP10Q96AY3 582 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 PPWD1Q96BP3 646 aaKnown RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 MAGED4Q96JG8 741 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 ZNF681Q96N22 645 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 CCDC115Q96NT0 180 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SLC46A1Q96NT5 459 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 AMDHD1Q96NU7 426 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 DGAT2Q96PD7 388 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SLC39A3Q9BRY0 314 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 ALOXE3Q9BYJ1 711 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 TGIF2Q9GZN2 237 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 VN1R1Q9GZP7 353 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SERHLQ9NQF3 203 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 NECTIN3Q9NQS3 549 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 ACSS1Q9NUB1 689 aaPredicted RBP9.79□□□□□ -0.84
TPM1-221ENST00000559831 SLAMF8Q9P0V8 285 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 MAP10Q9P2G4 905 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 PADI1Q9ULC6 663 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 MKL2Q9ULH7 1088 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 VPS4AQ9UN37 437 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 MAN2B2Q9Y2E5 1009 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 SNX8Q9Y5X2 465 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 AK5Q9Y6K8 562 aa9.79□□□□□ -0.84
TPM1-221ENST00000559831 IGLV3-12A0A075B6K2 115 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 A8MUA0 341 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 RAD1O60671 282 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 HNRNPCL1O60812 293 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 ERN1O75460 977 aaKnown RBP9.78□□□□□ -0.84
TPM1-221ENST00000559831 ALBP02768 609 aa9.78□□□□□ -0.84
TPM1-221ENST00000559831 KRT16P08779 473 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms