RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MAPKAP1Q9BPZ7 522 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PSD2Q9BQI7 771 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 YIPF4Q9BSR8 244 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 MVB12BQ9H7P6 319 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PELI2Q9HAT8 420 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 KCNK12Q9HB15 430 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PRSS16Q9NQE7 514 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CLN6Q9NWW5 311 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 SCHIP1Q9P0W5 487 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-216ENST00000559819 CLEC2DQ9UHP7 191 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 TSC22D4Q9Y3Q8 395 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 PLEKHM1Q9Y4G2 1056 aa9.53□□□□□ -0.88
LRRC28-216ENST00000559819 MUC22E2RYF6 1773 aaPredicted RBP9.52□□□□□ -0.88
LRRC28-216ENST00000559819 CCDC88CQ9P219 2028 aa9.52□□□□□ -0.88
LRRC28-216ENST00000559819 LINC01553A4QN01 128 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 CNOT3O75175 753 aaKnown RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 NFATC1O95644 943 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TUBA1BP68363 451 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 PIN1Q13526 163 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 HEPACAMQ14CZ8 416 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 CARTPTQ16568 116 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 ZNF750Q32MQ0 723 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 ADAMTSL4Q6UY14 1074 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TUBA1AQ71U36 451 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 NUDT13Q86X67 352 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 MEX3DQ86XN8 651 aaKnown RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 LYSMD2Q8IV50 215 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TP53I13Q8NBR0 393 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TEFMQ96QE5 360 aaKnown RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 UCK2Q9BZX2 261 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 MMP27Q9H306 513 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 OSGEPL1Q9H4B0 414 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 KLHL31Q9H511 634 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 WASH6PQ9NQA3 447 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 CTPS2Q9NRF8 586 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 SEMA3GQ9NS98 782 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 ZNF229Q9UJW7 825 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 DSPPQ9NZW4 1301 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 C4orf51C9J302 202 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 H3BN98 237 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 MID1O15344 667 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 UPK1BO75841 260 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 SEMA3DO95025 777 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 PCDH8O95206 1070 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 ACP5P13686 325 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 SPNP16150 400 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 CCT3P49368 545 aaKnown RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 EIF2B2P49770 351 aaKnown RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TEKQ02763 1124 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 SSX1Q16384 188 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 DCST1Q5T197 706 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 METRNLQ641Q3 311 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-216ENST00000559819 ZNF793Q6ZN11 406 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 ZNF367Q7RTV3 350 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 SLC30A8Q8IWU4 369 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 CYP4Z2PQ8N1L4 340 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 XAGE5Q8WWM1 108 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 FERD3LQ96RJ6 166 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 MGLLQ99685 303 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 C17orf62Q9BQA9 187 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 DPH7Q9BTV6 452 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 OR51I1Q9H343 314 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 GLIPR2Q9H4G4 154 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 TRPC4Q9UBN4 977 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 SERGEFQ9UGK8 458 aa9.52□□□□□ -0.89
LRRC28-216ENST00000559819 IGKV1-8A0A0C4DH67 115 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 A0A1W2PS29 197 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 PRR23AA6NEV1 266 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 EFCAB10A6NFE3 127 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 ARHGAP33O14559 1287 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 KIAA0513O60268 411 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 OSMP13725 252 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 DRD3P35462 400 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 KCNJ5P48544 419 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 LIMK1P53667 647 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 PRKAG1P54619 331 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 TAS2R38P59533 333 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 CSNK1G2P78368 415 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 MLF2Q15773 248 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 FBXO43Q4G163 708 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 TMEM240Q5SV17 173 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 STEAP3Q658P3 488 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 PGBD2Q6P3X8 592 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 TRIM73Q86UV7 250 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 ATCAYQ86WG3 371 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 FAM46DQ8NEK8 389 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 KBTBD8Q8NFY9 601 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 HPS1Q92902 700 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 RGMAQ96B86 450 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 CRELD1Q96HD1 420 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 INSM2Q96T92 566 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 KCNS3Q9BQ31 491 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 IMP3Q9NV31 184 aaKnown RBP9.51□□□□□ -0.89
LRRC28-216ENST00000559819 SEC14L3Q9UDX4 400 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 KCNK6Q9Y257 313 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 C1QTNF3-AMACRE9PGA6 284 aa9.51□□□□□ -0.89
LRRC28-216ENST00000559819 AQP9O43315 295 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms