RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 C7orf57Q8NEG2 295 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 PPCDCQ96CD2 204 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 CATSPER2Q96P56 530 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 DPY30Q9C005 99 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 SLC35C2Q9NQQ7 365 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 GIMAP4Q9NUV9 329 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 SH3BP4Q9P0V3 963 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 KLHL14Q9P2G3 628 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 ENTPD4Q9Y227 616 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 POLHQ9Y253 713 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 MAN2B2Q9Y2E5 1009 aa19.92■□□□□ 0.78
CASC4-204ENST00000557945 A0A1W2PS29 197 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 SYNDIG1LA6NDD5 238 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 SEC24DO94855 1032 aaPredicted RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 COX6A1P12074 109 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 COX7A2P14406 83 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 IDO1P14902 403 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 RPL3P39023 403 aaKnown RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 CLDN8P56748 225 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 CXADRP78310 365 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 IGLV3-21P80748 117 aaPredicted RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 PLIN5Q00G26 463 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 BIKQ13323 160 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 PCOLCEQ15113 449 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 DEFB109BQ30KR1 87 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 PAPD4Q6PIY7 484 aaKnown RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 NDUFAF7Q7L592 441 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 STON2Q8WXE9 905 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 PPWD1Q96BP3 646 aaKnown RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 RBM18Q96H35 190 aaKnown RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 LPAR4Q99677 370 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 ADAP2Q9NPF8 381 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 GPR45Q9Y5Y3 372 aa19.91■□□□□ 0.78
CASC4-204ENST00000557945 ANKRD11Q6UB99 2663 aaPredicted RBP19.91■□□□□ 0.78
CASC4-204ENST00000557945 IGHV1-45A0A0A0MS14 117 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 NSG1A0A0A6YYJ2 146 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 SCAMP2O15127 329 aaKnown RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 CPMP14384 443 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 PORP16435 677 aaPredicted RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 DDX5P17844 614 aaKnown RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 CSNK2A2P19784 350 aaPredicted RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 DRD4P21917 467 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 STT3AP46977 705 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 ELAVL1Q15717 326 aaKnown RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 GSTA3Q16772 222 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 PRSS53Q2L4Q9 553 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 MTERF3Q96E29 417 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 CNRIP1Q96F85 164 aaPredicted RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 FER1L6-AS2Q96M78 137 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 BBS4Q96RK4 519 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 PRPF18Q99633 342 aaKnown RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 ELAC2Q9BQ52 826 aaKnown RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 PELOQ9BRX2 385 aaKnown RBP19.9■□□□□ 0.78
CASC4-204ENST00000557945 ZNF700Q9H0M5 742 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 RABEP2Q9H5N1 569 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 ZNF160Q9HCG1 818 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 ATP6V1HQ9UI12 483 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 ADAM21Q9UKJ8 722 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 MAPRE3Q9UPY8 281 aa19.9■□□□□ 0.78
CASC4-204ENST00000557945 ARGFXA6NJG6 315 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 GABRR3A8MPY1 467 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 SLC35E2P0CK97 266 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 PCSK2P16519 638 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 NCF2P19878 526 aaPredicted RBP19.89■□□□□ 0.77
CASC4-204ENST00000557945 STX1BP61266 288 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 UFM1P61960 85 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 PDE7AQ13946 482 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 CPTPQ5TA50 214 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 SAMD14Q8IZD0 417 aaPredicted RBP19.89■□□□□ 0.77
CASC4-204ENST00000557945 ST13P4Q8IZP2 240 aaPredicted RBP19.89■□□□□ 0.77
CASC4-204ENST00000557945 OR7A2PQ8NGA2 310 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 NUDT8Q8WV74 236 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 WDR77Q9BQA1 342 aaPredicted RBP19.89■□□□□ 0.77
CASC4-204ENST00000557945 TUBB6Q9BUF5 446 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 BRINP2Q9C0B6 783 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 TAS2R7Q9NYW3 318 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 TRIM33Q9UPN9 1127 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 CLCA3PQ9Y6N3 262 aa19.89■□□□□ 0.77
CASC4-204ENST00000557945 C17orf105B2RV13 164 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 MASP2O00187 686 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 HPP00738 406 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 NT5EP21589 574 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 NTSP30990 170 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 CLNS1AP54105 237 aaKnown RBP19.88■□□□□ 0.77
CASC4-204ENST00000557945 ST3GAL2Q16842 350 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 PGS1Q32NB8 556 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 PDCD4Q53EL6 469 aaKnown RBP19.88■□□□□ 0.77
CASC4-204ENST00000557945 ZNF385BQ569K4 471 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 SPATA21Q7Z572 469 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 RIMKLAQ8IXN7 391 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 CCDC116Q8IYX3 515 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 MIER2Q8N344 545 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 LRRC25Q8N386 305 aaPredicted RBP19.88■□□□□ 0.77
CASC4-204ENST00000557945 DOK4Q8TEW6 326 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 ZNF681Q96N22 645 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 ZBTB18Q99592 522 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 DMXL2Q8TDJ6 3036 aa19.88■□□□□ 0.77
CASC4-204ENST00000557945 A0A1W2PQ72 361 aa19.87■□□□□ 0.77
CASC4-204ENST00000557945 SAGE2PA6NJ88 616 aa19.87■□□□□ 0.77
CASC4-204ENST00000557945 ANKRD28O15084 1053 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms