RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 TMEM249Q2WGJ8 235 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 BEX5Q5H9J7 111 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 FNDC7Q5VTL7 733 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 BICRALQ6AI39 1079 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 C11orf63Q6NUN7 778 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CNEP1R1Q8N9A8 125 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PGM2Q96G03 612 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 RILPQ96NA2 401 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 UCN2Q96RP3 112 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SLC39A3Q9BRY0 314 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 OPN3Q9H1Y3 402 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 NHEJ1Q9H9Q4 299 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ELOVL5Q9NYP7 299 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MAPRE3Q9UPY8 281 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 DHRS7Q9Y394 339 aa13.01□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CYR61O00622 381 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 B3GALT2O43825 422 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PGRP06401 933 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 APRTP07741 180 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 F7P08709 466 aaPredicted RBP13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CETN2P41208 172 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 KCNJ5P48544 419 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MASP1P48740 699 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CTBP1Q13363 440 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 NTRK2Q16620 822 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CENPUQ71F23 418 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ARIH2OSQ8N7S6 290 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SLC5A11Q8WWX8 675 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ATL1Q8WXF7 558 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 AKAP1Q92667 903 aaKnown RBP eCLIP13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 NEIL2Q969S2 332 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 GTPBP3Q969Y2 492 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 DNAJC7Q99615 494 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 GPR21Q99679 349 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 G6PC3Q9BUM1 346 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PARVBQ9HBI1 364 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CLCF1Q9UBD9 225 aa13□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PRR14LQ5THK1 2151 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MALRD1Q5VYJ5 2156 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 GOLGA6L9A6NEM1 432 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 LDB3O75112 727 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SNX4O95219 450 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 IGHV4-39P01824 125 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 THBDP07204 575 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 EGR1P18146 543 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 OGNP20774 298 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CASP9P55211 416 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 LIM2P55344 173 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 RWDD2BP57060 319 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 STXBP1P61764 594 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 REEP5Q00765 189 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ID2Q02363 134 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SERTAD2Q14140 314 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SCIMPQ6UWF3 145 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MILR1Q7Z6M3 343 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CILP2Q8IUL8 1156 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 GRAMD2AQ8IUY3 354 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 FAM83FQ8NEG4 500 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SLC35B2Q8TB61 432 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CD200R1Q8TD46 325 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 KCNJ9Q92806 393 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CAVIN3Q969G5 261 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 GAL3ST3Q96A11 431 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SENP5Q96HI0 755 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 TSNARE1Q96NA8 513 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 KRT12Q99456 494 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ESRP2Q9H6T0 727 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 FETUBQ9UGM5 382 aa12.99□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ALPK2Q86TB3 2170 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 TRRAPQ9Y4A5 3859 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 FRG2CA6NGY1 282 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 HRKO00198 91 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 EIF3FO00303 357 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ERI3O43414 337 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 NDUFS7O75251 213 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 TGM6O95932 706 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 C8GP07360 202 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 SOD3P08294 240 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PAMP19021 973 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 CHMP24386 653 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 HNRNPH1P31943 449 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 GCKP35557 465 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 EFTUD2Q15029 972 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PDLIM3Q53GG5 364 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 DUPD1Q68J44 220 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 ZNF549Q6P9A3 640 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 IL17RELQ6ZVW7 336 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MEX3DQ86XN8 651 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 PALM2Q8IXS6 379 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 KLHDC8AQ8IYD2 350 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 OR56A3Q8NH54 315 aa12.98□□□□□ -0.33
TRAPPC6B-207ENST00000557764 MS4A6EQ96DS6 147 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms