RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 IRS2Q9Y4H2 1338 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SLC10A1Q14973 349 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FRG2Q64ET8 278 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF704Q6ZNC4 412 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 GALNT10Q86SR1 603 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 B3GNT7Q8NFL0 401 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FRG2BQ96QU4 278 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SLC32A1Q9H598 525 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM39AQ9NV64 488 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 OAS1P00973 400 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ETV5P41161 510 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 CEACAM20Q6UY09 585 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 USP49Q70CQ1 688 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ABHD12BQ7Z5M8 362 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TPRA1Q86W33 373 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ADAMTS19Q8TE59 1207 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ATG4CQ96DT6 458 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RSPRY1Q96DX4 576 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 LGMNQ99538 433 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 NAA11Q9BSU3 229 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ANKRD34BA5PLL1 514 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 GAAP10253 952 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RPL35P42766 123 aaKnown RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SLC18B1Q6NT16 456 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FUT10Q6P4F1 479 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 FAM111BQ6SJ93 734 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 LANCL3Q6ZV70 420 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 ANKRD46Q86W74 232 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 SLC43A2Q8N370 569 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 OR8J1Q8NGP2 316 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 TBC1D20Q96BZ9 403 aa8.51□□□□□ -1.05
SYNE3-205ENST00000557275 LCMT2O60294 686 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 KNG1P01042 644 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 C6P13671 934 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ATP4BP51164 291 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TNFAIP8L2Q6P589 184 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 FBXO16Q8IX29 292 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 OR10T2Q8NGX3 314 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SEC22CQ9BRL7 303 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ERVK13-1Q9NX77 482 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 VEGFAP15692 232 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 RHCEP18577 417 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TGM4P49221 684 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 PPT1P50897 306 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MRPS6P82932 125 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SCARF1Q14162 830 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SNX27Q96L92 541 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ACAD8Q9UKU7 415 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 NSA2O95478 260 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TAGLNQ01995 201 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 GPR176Q14439 515 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MYLK3Q32MK0 819 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 PDLIM3Q53GG5 364 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF611Q8N823 705 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 BBS10Q8TAM1 723 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 THAP4Q8WY91 577 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SLC45A3Q96JT2 553 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF681Q96N22 645 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TMPRSS4Q9NRS4 437 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MED6O75586 246 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 RASAL1O95294 804 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 KCNJ5P48544 419 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 BAMBIQ13145 260 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 KCNJ8Q15842 424 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 EVA1AQ9H8M9 152 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TLX2O43763 284 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TGFB1P01137 390 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZC3H14Q6PJT7 736 aaKnown RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CD300LGQ6UXG3 332 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 KLHDC1Q8N7A1 406 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 KDM1BQ8NB78 822 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CHDHQ8NE62 594 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF442Q9H7R0 627 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CNTN3Q9P232 1028 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 NENFQ9UMX5 172 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 FAM170BA6NMN3 283 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF736B4DX44 427 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 RHBDL3P58872 404 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 GTF2BQ00403 316 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SLC30A7Q8NEW0 376 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 FOXRED1Q96CU9 486 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 UBL7Q96S82 380 aaPredicted RBP8.5□□□□□ -1.05
SYNE3-205ENST00000557275 METTL7AQ9H8H3 244 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 FZD3Q9NPG1 666 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 NPAP1Q9NZP6 1156 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 NPBWR1P48145 328 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 RHBDF2Q6PJF5 856 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF439Q8NDP4 499 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 TRBC2A0A5B9 178 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 MATN3O15232 486 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 SLC1A3P43003 542 aa8.5□□□□□ -1.05
SYNE3-205ENST00000557275 CLEC6AQ6EIG7 209 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms