RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 VPS11Q9H270 941 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 ACTR8Q9H981 624 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 CHST11Q9NPF2 352 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 PRDM7Q9NQW5 492 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 SNX15Q9NRS6 342 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 HPF1Q9NWY4 346 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 MS4A12Q9NXJ0 267 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 FAM53CQ9NYF3 392 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 CPSF2Q9P2I0 782 aaKnown RBP7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 VTI1BQ9UEU0 232 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 PHF11Q9UIL8 331 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 NFU1Q9UMS0 254 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 TNPO3Q9Y5L0 923 aaKnown RBP7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 KLF2Q9Y5W3 355 aaPredicted RBP7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 SVILO95425 2214 aa7.16□□□□□ -1.26
HNRNPC-226ENST00000556628 MYOCOSA0A1B0GUC4 107 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ARHGAP10A1A4S6 786 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 C17orf105B2RV13 164 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ACOT7O00154 380 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SAP18O00422 153 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 RTCAO00442 366 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 CYR61O00622 381 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 EIF1AYO14602 144 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 PEX1O43933 1283 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 CDC40O60508 579 aaKnown RBP eCLIP7.15□□□□□ -1.261e-6■■■■■ 29.9
HNRNPC-226ENST00000556628 LDB3O75112 727 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SMIM24O75264 130 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 TBX6O95947 436 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 RBP1P09455 135 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 EPORP19235 508 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 PTX3P26022 381 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 BUD31P41223 144 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 PIK3CBP42338 1070 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ALDH18A1P54886 795 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 IRF9Q00978 393 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 PLGLB1Q02325 96 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 PCDH1Q08174 1060 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SLAMF1Q13291 335 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 E2F2Q14209 437 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SETDB1Q15047 1291 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 HSP90B2PQ58FF3 399 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 OR4C11Q6IEV9 310 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 IL20RBQ6UXL0 311 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 Q6ZPB1 254 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SULF2Q8IWU5 870 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 CENPLQ8N0S6 344 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ITLN2Q8WWU7 325 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SCYL1Q96KG9 808 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 CSF3RQ99062 836 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 FMO2Q99518 471 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 MTERF1Q99551 399 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 MAPKAP1Q9BPZ7 522 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 OR8D2Q9GZM6 311 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 OR51B5Q9H339 312 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ACSS3Q9H6R3 686 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 RPF2Q9H7B2 306 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 WDR41Q9HAD4 459 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 MED4Q9NPJ6 270 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 IGSF5Q9NSI5 407 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 LYARQ9NX58 379 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 KCMF1Q9P0J7 381 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 TINAGQ9UJW2 476 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 TMCO1Q9UM00 188 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 PPIEQ9UNP9 301 aaKnown RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ZNF835Q9Y2P0 537 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 USP9YO00507 2555 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 USP9XQ93008 2570 aaPredicted RBP7.15□□□□□ -1.26
HNRNPC-226ENST00000556628 WWP2O00308 870 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 HS6ST1O60243 411 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 UGDHO60701 494 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 OR2J2O76002 312 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 KRT38O76015 456 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 SCELO95171 688 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 CLDN9O95484 217 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 CLDN14O95500 239 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 P04436 131 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 TPOP07202 933 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 MTHFD2P13995 350 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 COX6B1P14854 86 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 ZNF16P17020 682 aaPredicted RBP7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 AGAP20933 346 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 HTR1EP28566 365 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 PTGS2P35354 604 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 SERPINB9P50453 376 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 GPR143P51810 404 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 CCNG1P51959 295 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 HK2P52789 917 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 ARFIP1P53367 373 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 GPR85P60893 370 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 RPS13P62277 151 aaKnown RBP7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 PLIN5Q00G26 463 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 GTF2H2Q13888 395 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 PCBP2Q15366 365 aaKnown RBP eCLIP7.14□□□□□ -1.272e-70■■■□□ 16.7
HNRNPC-226ENST00000556628 CPSF6Q16630 551 aaKnown RBP eCLIP7.14□□□□□ -1.273e-7■■■□□ 15.6
HNRNPC-226ENST00000556628 TSNAXIP1Q2TAA8 658 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 TTC19Q6DKK2 380 aaPredicted RBP7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 GTF2H2CQ6P1K8 395 aa7.14□□□□□ -1.27
HNRNPC-226ENST00000556628 METTL2BQ6P1Q9 378 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms