RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 DUSP8Q13202 625 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 SP140Q13342 867 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PIGGQ5H8A4 983 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 EXOSC6Q5RKV6 272 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 ANKRD34AQ69YU3 496 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 ZNF470Q6ECI4 717 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 VASNQ6EMK4 673 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 UGT3A1Q6NUS8 523 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 NEPROQ6NW34 567 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 CAVIN1Q6NZI2 390 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 OPN5Q6U736 354 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 C9orf40Q8IXQ3 194 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 TC2NQ8N9U0 490 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 MORN4Q8NDC4 146 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 ZNF721Q8TF20 911 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PYCR2Q96C36 320 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 HSPBAP1Q96EW2 488 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 SNF8Q96H20 258 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 GBP4Q96PP9 640 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PIGQQ9BRB3 760 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 RHBGQ9H310 441 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 EPB41L4BQ9H329 900 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 PARVBQ9HBI1 364 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 ZNF701Q9NV72 531 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-218ENST00000555628 VTI1BQ9UEU0 232 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 IKBKGQ9Y6K9 419 aa8.31□□□□□ -1.08
PRKCH-218ENST00000555628 ZCWPW2A0A1B0GU75 182 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 TCRBV7S3A2A0A539 114 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 E7EVH7 732 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 AVILO75366 819 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 ETHE1O95571 254 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 IFNB1P01574 187 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 C1QAP02745 245 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 P04436 131 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 C8GP07360 202 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 HNF4AP41235 474 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 SLC1A2P43004 574 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 TRPC1P48995 793 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 NPY2RP49146 381 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 TPM4P67936 248 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 CCZ1BP86790 482 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 CCZ1P86791 482 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 SIX1Q15475 284 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 ACKR1Q16570 336 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 ADPRMQ3LIE5 342 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 PRAMEF20Q5VT98 475 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 ARMC3Q5W041 872 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 HMBOX1Q6NT76 420 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 CNGA4Q8IV77 575 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 ZNF595Q8IYB9 648 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 TMEM132CQ8N3T6 1108 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 RASGEF1CQ8N431 466 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 OTUD6BQ8N6M0 293 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 FAM47BQ8NA70 645 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 OR14A16Q8NHC5 309 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 NUBPLQ8TB37 319 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 SLC2A12Q8TD20 617 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 EEF1AKMT1Q8WVE0 214 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 MS4A6EQ96DS6 147 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 SPACA9Q96E40 222 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 WDYHV1Q96HA8 205 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 G6PC3Q9BUM1 346 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 RBM24Q9BX46 236 aaKnown RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 NPLQ9BXD5 320 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 FBXO6Q9NRD1 293 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 PRTFDC1Q9NRG1 225 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 BFARQ9NZS9 450 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 PAK5Q9P286 719 aa8.3□□□□□ -1.08
PRKCH-218ENST00000555628 BOKQ9UMX3 212 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 PACSIN2Q9UNF0 486 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-218ENST00000555628 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 SYCE3A1L190 88 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 ANKRD33BA6NCL7 494 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 SYNDIG1LA6NDD5 238 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 NRDCO43847 1150 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 SERPIND1P05546 499 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 HPNP05981 417 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 CETN2P41208 172 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 MAGEA6P43360 314 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 CDK9P50750 372 aaKnown RBP8.29□□□□□ -1.08
PRKCH-218ENST00000555628 IGLV3-21P80748 117 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-218ENST00000555628 ASPHQ12797 758 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 TOR1AIP1Q5JTV8 583 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 SLC22A10Q63ZE4 541 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 DUPD1Q68J44 220 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 FDX2Q6P4F2 183 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 CLNKQ7Z7G1 428 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 HIPK1Q86Z02 1210 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.29□□□□□ -1.08
PRKCH-218ENST00000555628 PM20D2Q8IYS1 436 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 CCDC170Q8IYT3 715 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 OR10G3Q8NGC4 313 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 SLC5A11Q8WWX8 675 aa8.29□□□□□ -1.08
PRKCH-218ENST00000555628 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms