RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CYBRD1Q53TN4 286 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 KIAA1614Q5VZ46 1190 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 REEP3Q6NUK4 255 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SLC48A1Q6P1K1 146 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 BORAQ6PGQ7 559 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SLC30A9Q6PML9 568 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 FAM92BQ6ZTR7 304 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TMEM26Q6ZUK4 368 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 RD3Q7Z3Z2 195 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 OOSP2Q86WS3 158 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 NAGSQ8N159 534 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 C10orf111Q8N326 155 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SPEM1Q8N4L4 309 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 FAM86B1Q8N7N1 296 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ARL10Q8N8L6 244 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ACOT4Q8N9L9 421 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SETD9Q8NE22 299 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 C7orf57Q8NEG2 295 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 OR4E2Q8NGC2 313 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 OR56A1Q8NGH5 318 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 FLVCR1-AS1Q8TAF5 88 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 MIPOL1Q8TD10 442 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ADAMTS16Q8TE57 1224 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 GEMIN6Q8WXD5 167 aaKnown RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 RERGQ96A58 199 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 FKBP10Q96AY3 582 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 TEFMQ96QE5 360 aaKnown RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 OR2A14Q96R47 310 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 OR2A5Q96R48 311 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF607Q96SK3 696 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ZFYVE21Q9BQ24 234 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 C17orf62Q9BQA9 187 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 GPR174Q9BXC1 333 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-221ENST00000553498 CHRNA10Q9GZZ6 450 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 REEP1Q9H902 201 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 LYRM4Q9HD34 91 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 LTB4R2Q9NPC1 389 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SLC35C2Q9NQQ7 365 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SPHK1Q9NYA1 384 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ACTR10Q9NZ32 417 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 BLOC1S6Q9UL45 172 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 CYP8B1Q9UNU6 501 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ERVK-11Q9UQG0 969 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ENTPD4Q9Y227 616 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ASB4Q9Y574 426 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF780BQ9Y6R6 833 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 SPACA6W5XKT8 324 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 COL4A2P08572 1712 aa6.92□□□□□ -1.3
ATXN3-221ENST00000553498 IGHV1OR15-9A0A0B4J2B8 117 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 A0A0J9YY10 115 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 ARRDC5A6NEK1 342 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TRIM64CA6NLI5 447 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 METTL12A8MUP2 240 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 C9orf172C9J069 976 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 C5orf58C9J3I9 102 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 BTN3A3O00478 584 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 DLL1O00548 723 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 PROM1O43490 865 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 UGT2B11O75310 529 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 JRKO75564 520 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SERPINB7O75635 380 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 BMP10O95393 424 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 B3GALT4O96024 378 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 C9P02748 559 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CSF2P04141 144 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 NTRK1P04629 796 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SERPIND1P05546 499 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SMIM10L1P0DMW3 83 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 ITGAMP11215 1152 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 ETFAP13804 333 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 NME1P15531 152 aaKnown RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 UGT2B7P16662 529 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CSNK2A2P19784 350 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SOAT1P35610 550 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 FASLGP48023 281 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 CCT3P49368 545 aaKnown RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 RGS19P49795 217 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 KHKP50053 298 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 PLA2G16P53816 162 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 KCNJ10P78508 379 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 PRR5P85299 388 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 MYBPC1Q00872 1141 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 EIF2B5Q13144 721 aaKnown RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 APOFQ13790 326 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 KEAP1Q14145 624 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 GPR18Q14330 331 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 NKG7Q16617 165 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TOR1AIP1Q5JTV8 583 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 RBM48Q5RL73 367 aaKnown RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TPRG1LQ5T0D9 272 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 ARMC6Q6NXE6 501 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 TTC33Q6PID6 262 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-221ENST00000553498 SPESP1Q6UW49 350 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 ANGPTL8Q6UXH0 198 aa6.91□□□□□ -1.3
ATXN3-221ENST00000553498 Q6ZS52 159 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms