RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CPN1P15169 458 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 CRYGSP22914 178 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 PLA2G16P53816 162 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 KRTAP1-1Q07627 177 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 FOXF2Q12947 444 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 CCNG2Q16589 344 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 NTRK2Q16620 822 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 DRICH1Q6PGQ1 229 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-220ENST00000551716 TMIGD1Q6UXZ0 262 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 SPNS2Q8IVW8 549 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 TAGAPQ8N103 731 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 TMEM171Q8WVE6 324 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 CCT6BQ92526 530 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 DIO2Q92813 273 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 ZNF669Q96BR6 464 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-220ENST00000551716 LINGO1Q96FE5 620 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 UCN2Q96RP3 112 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 MED18Q9BUE0 208 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 ROGDIQ9GZN7 287 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 PITHD1Q9GZP4 211 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-220ENST00000551716 REXO4Q9GZR2 422 aaKnown RBP13.97□□□□□ -0.17
CACNB3-220ENST00000551716 LACRTQ9GZZ8 138 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 UBQLN3Q9H347 655 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 LYRM4Q9HD34 91 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 C20orf96Q9NUD7 363 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-220ENST00000551716 ZNF701Q9NV72 531 aaPredicted RBP13.97□□□□□ -0.17
CACNB3-220ENST00000551716 SLC6A5Q9Y345 797 aa13.97□□□□□ -0.17
CACNB3-220ENST00000551716 HAX1O00165 279 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 MSTNO14793 375 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 PHF1O43189 567 aaPredicted RBP13.96□□□□□ -0.17
CACNB3-220ENST00000551716 CDH16O75309 829 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 CLEC3AO75596 197 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 GUCA1CO95843 209 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 IGKV3-11P04433 115 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 GNAZP19086 355 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 CHMP24386 653 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 HNRNPH1P31943 449 aaKnown RBP13.96□□□□□ -0.17
CACNB3-220ENST00000551716 MASP1P48740 699 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 RPP38P78345 283 aaKnown RBP13.96□□□□□ -0.17
CACNB3-220ENST00000551716 TNK1Q13470 666 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 TOMM20Q15388 145 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 CHRFAM7AQ494W8 412 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 WIPI1Q5MNZ9 446 aaPredicted RBP13.96□□□□□ -0.17
CACNB3-220ENST00000551716 SLC29A4Q7RTT9 530 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 KRT78Q8N1N4 520 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 INTS12Q96CB8 462 aaKnown RBP13.96□□□□□ -0.17
CACNB3-220ENST00000551716 NT5DC2Q9H857 520 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 ADGRE2Q9UHX3 823 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 SLC22A14Q9Y267 594 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.17
CACNB3-220ENST00000551716 EML6Q6ZMW3 1958 aa13.96□□□□□ -0.18
CACNB3-220ENST00000551716 IQANK1A0A1B0GTG1 560 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 MYOCOSA0A1B0GUC4 107 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ANKDD1BA6NHY2 528 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 LDB3O75112 727 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 FTCDO95954 541 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 C1GALT1C1LP0DN25 315 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 STT3AP46977 705 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ATP5J2P56134 94 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ETFDHQ16134 617 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ADPRMQ3LIE5 342 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ABHD17CQ6PCB6 329 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 C9orf40Q8IXQ3 194 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 TXLNBQ8N3L3 684 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 SRFBP1Q8NEF9 429 aaKnown RBP13.95□□□□□ -0.18
CACNB3-220ENST00000551716 FBXL20Q96IG2 436 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 GNRHR2Q96P88 292 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 DGAT2Q96PD7 388 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 CSF3RQ99062 836 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 FAM167BQ9BTA0 163 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 CAPS2Q9BXY5 557 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ANGPTL4Q9BY76 406 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 KLHL28Q9NXS3 571 aa13.95□□□□□ -0.18
CACNB3-220ENST00000551716 ZCWPW2A0A1B0GU75 182 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 SIAH2O43255 324 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 SOX30O94993 753 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 CRHP06850 196 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 F7P08709 466 aaPredicted RBP13.94□□□□□ -0.18
CACNB3-220ENST00000551716 MLNP12872 115 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 CERS1P27544 350 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 CPOXP36551 454 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 TIAL1Q01085 375 aaKnown RBP eCLIP13.94□□□□□ -0.18
CACNB3-220ENST00000551716 ENPP6Q6UWR7 440 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 MILR1Q7Z6M3 343 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 SLC44A1Q8WWI5 657 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 RILPQ96NA2 401 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 SLC39A3Q9BRY0 314 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 YAE1D1Q9NRH1 226 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 ELOVL5Q9NYP7 299 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 ZKSCAN5Q9Y2L8 839 aa13.94□□□□□ -0.18
CACNB3-220ENST00000551716 OR6C76A6NM76 312 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 H0Y3Z8 333 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 SNPHO15079 494 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 CD5LO43866 347 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 CD79BP40259 229 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 MAGEA6P43360 314 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 SLCO1A2P46721 670 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 KCNC1P48547 511 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 HNMTP50135 292 aa13.93□□□□□ -0.18
CACNB3-220ENST00000551716 NAGLUP54802 743 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms