RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MCATQ8IVS2 390 aaKnown RBP18.57■□□□□ 0.56
SSH1-209ENST00000551165 DOK4Q8TEW6 326 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 YIPF4Q9BSR8 244 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 RSPO3Q9BXY4 272 aaPredicted RBP18.57■□□□□ 0.56
SSH1-209ENST00000551165 SOX17Q9H6I2 414 aaPredicted RBP18.57■□□□□ 0.56
SSH1-209ENST00000551165 ZCCHC3Q9NUD5 404 aaKnown RBP18.57■□□□□ 0.56
SSH1-209ENST00000551165 LRIT1Q9P2V4 623 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 ARID1BQ8NFD5 2236 aaPredicted RBP18.57■□□□□ 0.56
SSH1-209ENST00000551165 IGHV5-51A0A0C4DH38 117 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 PRAMEF27A3QJZ7 478 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 FAM227AF5H4B4 570 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 SGK494L7N484 410 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 M0QX08 132 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 HMGN4O00479 90 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 ARAFP10398 606 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 MAGEA2P43356 314 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 SLC38A5Q8WUX1 472 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 NCSTNQ92542 709 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 UCK1Q9HA47 277 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 RPS6KA6Q9UK32 745 aa18.57■□□□□ 0.56
SSH1-209ENST00000551165 CACNA1EQ15878 2313 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 URADA6NGE7 173 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 ZSCAN9O15535 394 aaPredicted RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 HOXA6P31267 233 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 KCNJ10P78508 379 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 SIGLEC14Q08ET2 396 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
SSH1-209ENST00000551165 SLC35F3Q8IY50 421 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 ARHGEF39Q8N4T4 335 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 DNAJC22Q8N4W6 341 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 SIMC1Q8NDZ2 872 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 KAT2AQ92830 837 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 YY1AP1Q9H869 796 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 IL1RAPQ9NPH3 570 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 PRMT8Q9NR22 394 aaPredicted RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 ENTPD4Q9Y227 616 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 RHPN2P1A8MT19 583 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 H0YJX3 145 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 LYNP07948 512 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 DDX5P17844 614 aaKnown RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 CSNK2A2P19784 350 aaPredicted RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 PRKACGP22612 351 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 CSTF1Q05048 431 aaKnown RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 LAPTM4AQ15012 233 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 TEAD4Q15561 434 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 IQCCQ4KMZ1 466 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 KLHL35Q6PF15 583 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 UGT2A3Q6UWM9 527 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 TSEN54Q7Z6J9 526 aaKnown RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 STK32CQ86UX6 486 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 BARD1Q99728 777 aaKnown RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 IER2Q9BTL4 223 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.56■□□□□ 0.56
SSH1-209ENST00000551165 SLC22A7Q9Y694 548 aa18.56■□□□□ 0.56
SSH1-209ENST00000551165 PRAMEF25A6NGN4 478 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 GNGT2O14610 69 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 GALR3O60755 368 aaPredicted RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 BCHEP06276 602 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 OR12D1P0DN82 309 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 MC3RP41968 323 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 PI4KAP42356 2102 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 MRPS35P82673 323 aaKnown RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 RBBP4Q09028 425 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 PMS2CLQ68D20 193 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 GATAD2AQ86YP4 633 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 MARVELD2Q8N4S9 558 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 SMYD1Q8NB12 490 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 OR9A4Q8NGU2 314 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 C16orf58Q96GQ5 468 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 SMURF2Q9HAU4 748 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 SUV39H1O43463 412 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 GNAO1P09471 354 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 NELFEP18615 380 aaKnown RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 BUD31P41223 144 aaPredicted RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 OR1E2P47887 323 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 PCBP3P57721 371 aaKnown RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 CFHR1Q03591 330 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 CEBPEQ15744 281 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 ZNF630Q2M218 657 aaPredicted RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 C6orf132Q5T0Z8 1188 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 PACRGLQ8N7B6 248 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 COL26A1Q96A83 441 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 C7orf34Q96L11 122 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 NR1H4Q96RI1 486 aaPredicted RBP18.55■□□□□ 0.56
SSH1-209ENST00000551165 ROGDIQ9GZN7 287 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 OR51I1Q9H343 314 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 RAD21L1Q9H4I0 556 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 RAB23Q9ULC3 237 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 BDP1A6H8Y1 2624 aa18.55■□□□□ 0.56
SSH1-209ENST00000551165 CCDC163A0A0D9SF12 145 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 HRO43593 1189 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 LDB3O75112 727 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 RDH16O75452 317 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 SNAP29O95721 258 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 CLIC3O95833 236 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 TFPTP0C1Z6 253 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 SELENOWP63302 87 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 SHC2P98077 582 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 BLMHQ13867 455 aa18.54■□□□□ 0.56
SSH1-209ENST00000551165 WDR5BQ86VZ2 330 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms