RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LRTM1Q9HBL6 345 aa12.82□□□□□ -0.36
TROAP-213ENST00000550709 ANAPC2Q9UJX6 822 aa12.82□□□□□ -0.36
TROAP-213ENST00000550709 CCL27Q9Y4X3 112 aa12.82□□□□□ -0.36
TROAP-213ENST00000550709 DYTNA2CJ06 578 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 TMEM114B3SHH9 223 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 SUV39H1O43463 412 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 SKAP2O75563 359 aaPredicted RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 ERAL1O75616 437 aaKnown RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 RSL1D1O76021 490 aaKnown RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 DDAH2O95865 285 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 GRK2P25098 689 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 SLC1A6P48664 564 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 CLCN2P51788 898 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 TRA2BP62995 288 aaKnown RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 IGLV3-21P80748 117 aaPredicted RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 ZNF267Q14586 743 aaPredicted RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 PLEKHN1Q494U1 663 aaPredicted RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 GALNTL6Q49A17 601 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 TTMPQ5BVD1 217 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 FAM180BQ6P0A1 224 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 SLC48A1Q6P1K1 146 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 IGFL2Q6UWQ7 119 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 Q6ZSR9 355 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ZNF605Q86T29 641 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 RPS19BP1Q86WX3 136 aaKnown RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 HPS6Q86YV9 775 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 BEST3Q8N1M1 668 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 SLC2A12Q8TD20 617 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 VMP1Q96GC9 406 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ATP6V1G3Q96LB4 118 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ZNF354BQ96LW1 612 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 NPAS2Q99743 824 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 CNPPD1Q9BV87 410 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ILKAPQ9H0C8 392 aaPredicted RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.81□□□□□ -0.36
TROAP-213ENST00000550709 LIN28AQ9H9Z2 209 aaKnown RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 SLAMF7Q9NQ25 335 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 PFDN4Q9NQP4 134 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 C1orf109Q9NX04 203 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ANKRD10Q9NXR5 420 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 HEY2Q9UBP5 337 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 GIMAP2Q9UG22 337 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ZNF223Q9UK11 482 aaPredicted RBP12.81□□□□□ -0.36
TROAP-213ENST00000550709 B3GNT3Q9Y2A9 372 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 COL6A6A6NMZ7 2263 aa12.81□□□□□ -0.36
TROAP-213ENST00000550709 ATP6AP2A0A1C7CYW4 349 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 C1orf226A1L170 272 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 SYNDIG1LA6NDD5 238 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 TTLL8A6PVC2 850 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 PYCARD-AS1I3L0S3 204 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 HRKO00198 91 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 DYRK3O43781 588 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 PRKNO60260 465 aaPredicted RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 PEX11AO75192 247 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 ATP6AP2O75787 350 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 SASH3O75995 380 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 PTGER1P34995 402 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 FEN1P39748 380 aaKnown RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 CASRP41180 1078 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 GPR143P51810 404 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 MLLT10P55197 1068 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 C2orf80Q0P641 193 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 BST1Q10588 318 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 MEP1AQ16819 746 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 NOXRED1Q6NXP6 359 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 H3F3CQ6NXT2 135 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 GALNT18Q6P9A2 607 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 C16orf47Q6ZP98 133 aaPredicted RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 ST13P4Q8IZP2 240 aaPredicted RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 ZNF781Q8N8C0 355 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 MORN4Q8NDC4 146 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 RIT1Q92963 219 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 PNPLA2Q96AD5 504 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 KLHL29Q96CT2 875 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 C11orf24Q96F05 449 aaPredicted RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 SENP5Q96HI0 755 aaPredicted RBP12.8□□□□□ -0.36
TROAP-213ENST00000550709 PPP1R36Q96LQ0 422 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 EPN3Q9H201 632 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 VIPAS39Q9H9C1 493 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 MAP10Q9P2G4 905 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 CES1P1Q9UKY3 287 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 PSME2Q9UL46 239 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 CNTRLQ7Z7A1 2325 aa12.8□□□□□ -0.36
TROAP-213ENST00000550709 SCN2AQ99250 2005 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 CFAP46Q8IYW2 2715 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 ZNF462Q96JM2 2506 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 GABRR3A8MPY1 467 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 ZFAND5O76080 213 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 CPMP14384 443 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 NT5EP21589 574 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 SLC18A1P54219 525 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 ERVK-8P63133 956 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 OC90Q02509 493 aaPredicted RBP12.79□□□□□ -0.36
TROAP-213ENST00000550709 ZNF763Q0D2J5 394 aa12.79□□□□□ -0.36
TROAP-213ENST00000550709 BIKQ13323 160 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms