RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SNPHO15079 494 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 TNFRSF21O75509 655 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 CD40LGP29965 261 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 CRISP1P54107 249 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 OLR1P78380 273 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 ZC3H12BQ5HYM0 836 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 KHDRBS2Q5VWX1 349 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 NIPAL1Q6NVV3 410 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 SMARCD3Q6STE5 483 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 VITQ6UXI7 678 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 OR4E2Q8NGC2 313 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 RHOXF1Q8NHV9 184 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 SPPL3Q8TCT6 385 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 S100ZQ8WXG8 99 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 COQ8BQ96D53 544 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 EPYCQ99645 322 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 KXD1Q9BQD3 176 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 SPATA7Q9P0W8 599 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 NTNG1Q9Y2I2 539 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 ENPP4Q9Y6X5 453 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 MYL12BO14950 172 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 CDK1P06493 297 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 HOXB9P17482 250 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 KELP23276 732 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 BMPR1AP36894 532 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 RGS6P49758 472 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 UGT2B15P54855 530 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 SGCGQ13326 291 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 ELAVL3Q14576 367 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 HNRNPA1L2Q32P51 320 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 NDUFAF5Q5TEU4 345 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 STEAP3Q658P3 488 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 FRMPD2BQ6IN97 320 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 FAM71E1Q6IPT2 247 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 FAHD1Q6P587 224 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 IPCEF1Q8WWN9 437 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 C1GALT1C1Q96EU7 318 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 PPP1R16AQ96I34 528 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 DPH7Q9BTV6 452 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 BEX2Q9BXY8 128 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 SLIRPQ9GZT3 109 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 NECTIN3Q9NQS3 549 aa12.98□□□□□ -0.33
PRPF40B-209ENST00000548825 PGRMC2O15173 223 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 MED26O95402 600 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 PCYT1AP49585 367 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 OR2G6Q5TZ20 316 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 LRRTM4Q86VH4 590 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 GHDCQ8N2G8 530 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 CHCHD4Q8N4Q1 142 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 ZG16BQ96DA0 208 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 GNRH1P01148 92 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 H1F0P07305 194 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 ADRA2AP08913 450 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 TGFBR2P37173 567 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 NR4A2P43354 598 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 CCR8P51685 355 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 WSCD2Q2TBF2 565 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 C18orf63Q68DL7 685 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 USP30Q70CQ3 517 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 VN1R5Q7Z5H4 357 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 LHFPL3Q86UP9 236 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 METTL4Q8N3J2 472 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 FLCNQ8NFG4 579 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 FGF13Q92913 245 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 TREX2Q9BQ50 279 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 QPCTLQ9NXS2 382 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 KLHL42Q9P2K6 505 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 CABIN1Q9Y6J0 2220 aa12.97□□□□□ -0.33
PRPF40B-209ENST00000548825 CLDN24A6NM45 220 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 FFAR1O14842 300 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SERPINI2O75830 405 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 MFN2O95140 757 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 CSF2P04141 144 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 CA3P07451 260 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 HSD3B1P14060 373 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SPNP16150 400 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 HSD3B2P26439 372 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 PPP2R1BP30154 601 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SOX6P35712 828 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 FAM46CQ5VWP2 391 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 PLEKHG7Q6ZR37 379 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 DCUN1D3Q8IWE4 304 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SLC35G5Q96KT7 338 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 TOX2Q96NM4 488 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 UCK2Q9BZX2 261 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 EGLN3Q9H6Z9 239 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 WDR26Q9H7D7 661 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 RC3H2Q9HBD1 1191 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 AKIP1Q9NQ31 210 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 MKLN1Q9UL63 735 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 PADI2Q9Y2J8 665 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms