RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 AVPR1BP47901 424 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 LSSP48449 732 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 XKP51811 444 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 MVDP53602 400 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 GRM7Q14831 915 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 NR1D2Q14995 579 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 PRTGQ2VWP7 1150 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 YOD1Q5VVQ6 348 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 FRMPD2BQ6IN97 320 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 TLDC1Q6P9B6 456 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 WDR74Q6RFH5 385 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ENPP6Q6UWR7 440 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 KBTBD2Q8IY47 623 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 CCDC116Q8IYX3 515 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 OR4N4Q8N0Y3 316 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 AMER3Q8N944 861 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 OR5K1Q8NHB7 308 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ZCCHC10Q8TBK6 192 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 CACYBPQ9HB71 228 aaKnown RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ENAMQ9NRM1 1142 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ZCCHC3Q9NUD5 404 aaKnown RBP12.69□□□□□ -0.38
PTCH1-215ENST00000547672 SOHLH2Q9NX45 425 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF639Q9UID6 485 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 SCOCQ9UIL1 159 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 CDC14AQ9UNH5 594 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 THADAQ6YHU6 1953 aa12.69□□□□□ -0.38
PTCH1-215ENST00000547672 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 SAC3D1A6NKF1 404 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 PLOD2O00469 737 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 E2F6O75461 281 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 GPR75O95800 540 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 SYPP08247 313 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 RNH1P13489 461 aaKnown RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 RAB38P57729 211 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 HSD11B2P80365 405 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 DMWDQ09019 674 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 SLC14A1Q13336 389 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 SQSTM1Q13501 440 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 RUNX2Q13950 521 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 NR0B2Q15466 257 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 CLPPQ16740 277 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF528Q3MIS6 628 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 PLK5Q496M5 336 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 IFI44LQ53G44 452 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 COX20Q5RI15 118 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 C18orf63Q68DL7 685 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 ZCCHC12Q6PEW1 402 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF761Q86XN6 746 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 APLFQ8IW19 511 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 MMP21Q8N119 569 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 MARVELD2Q8N4S9 558 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 CBR4Q8N4T8 237 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 OR5AK3PQ8NH89 298 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 FKBP10Q96AY3 582 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 ZNF285Q96NJ3 590 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 TGM7Q96PF1 710 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 FCRL4Q96PJ5 515 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 MAP3K3Q99759 626 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 RBM4BQ9BQ04 359 aaKnown RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 RBM4Q9BWF3 364 aaKnown RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 CAAP1Q9H8G2 361 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 SLAMF7Q9NQ25 335 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 SIRT3Q9NTG7 399 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 EXD2Q9NVH0 621 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 NTMQ9P121 344 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 OAZ3Q9UMX2 235 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 PADI2Q9Y2J8 665 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 NAALAD2Q9Y3Q0 740 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 FAM32AQ9Y421 112 aaKnown RBP12.68□□□□□ -0.38
PTCH1-215ENST00000547672 RNF215Q9Y6U7 377 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 V9GYQ6 96 aa12.68□□□□□ -0.38
PTCH1-215ENST00000547672 NUP214P35658 2090 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 IGHV1OR21-1A0A087WYE8 117 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 A0A1B0GTQ1 180 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 HYKKA2RU49 373 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 GLOD5A6NK44 160 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 H0YIG0 161 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 M0QX08 132 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 ADAMDEC1O15204 470 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 P2RX6O15547 441 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 SDC3O75056 442 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 STATHP02808 62 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 MSL3P1P0C860 447 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 NR2F1P10589 423 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 CDH2P19022 906 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 DNAJA1P31689 397 aaKnown RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 CDK9P50750 372 aaKnown RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 DUSP3P51452 185 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-215ENST00000547672 ALDH3A2P51648 485 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 RPS6KA3P51812 740 aa12.67□□□□□ -0.38
PTCH1-215ENST00000547672 CRISP3P54108 245 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms