RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 WASHC1A8K0Z3 465 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 SLCO1B7G3V0H7 640 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 K7EM74 188 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 DPM1O60762 260 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 PRKRAO75569 313 aaKnown RBP13.51□□□□□ -0.25
DDX54-203ENST00000546869 IFNA16P05015 189 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 DDCP20711 480 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 CLCN2P51788 898 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 XKP51811 444 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 MFAP5Q13361 173 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 CEBPEQ15744 281 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 SPRED3Q2MJR0 410 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 FAM71E1Q6IPT2 247 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 ISLR2Q6UXK2 745 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 AGR3Q8TD06 166 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 BRIX1Q8TDN6 353 aaKnown RBP13.51□□□□□ -0.25
DDX54-203ENST00000546869 UCN3Q969E3 161 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 C19orf60Q96EN9 201 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 VMP1Q96GC9 406 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 DGAT2Q96PD7 388 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 RNF32Q9H0A6 362 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 RYDENQ9NUL5 291 aaKnown RBP13.51□□□□□ -0.25
DDX54-203ENST00000546869 HEY2Q9UBP5 337 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 TEKT2Q9UIF3 430 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
DDX54-203ENST00000546869 A8MUA0 341 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 C17orf105B2RV13 164 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 DYRK3O43781 588 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 TBX19O60806 448 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 VPS4BO75351 444 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 DDAH2O95865 285 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 PDGFAP04085 211 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 ATP1B1P05026 303 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 CELA2AP08217 269 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 IL3P08700 152 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 CPMP14384 443 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 PORP16435 677 aaPredicted RBP13.5□□□□□ -0.25
DDX54-203ENST00000546869 PCSK2P16519 638 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 TNNI3P19429 210 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 CSNK2A2P19784 350 aaPredicted RBP13.5□□□□□ -0.25
DDX54-203ENST00000546869 MAPK1P28482 360 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 HK2P52789 917 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 MAD2L1Q13257 205 aaPredicted RBP13.5□□□□□ -0.25
DDX54-203ENST00000546869 ATP6AP1LQ52LC2 224 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 OR1N1Q8NGS0 311 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 HAS2Q92819 552 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 ART5Q96L15 291 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 ZNF354BQ96LW1 612 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 C7orf26Q96N11 449 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 ZNF681Q96N22 645 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 KCNK13Q9HB14 408 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 MED4Q9NPJ6 270 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
DDX54-203ENST00000546869 POLR3HQ9Y535 204 aaPredicted RBP13.5□□□□□ -0.25
DDX54-203ENST00000546869 IGKV3-11P04433 115 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 PRPS2P11908 318 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 ASMTP46597 345 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 ID2Q02363 134 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 EMX2Q04743 252 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 C2orf80Q0P641 193 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 RAPSNQ13702 412 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 ZADH2Q8N4Q0 377 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 SLC5A8Q8N695 610 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 PIWIL2Q8TC59 973 aaKnown RBP13.49□□□□□ -0.25
DDX54-203ENST00000546869 SLC2A12Q8TD20 617 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 ZNF721Q8TF20 911 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 RIT1Q92963 219 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 NCLNQ969V3 563 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 PPWD1Q96BP3 646 aaKnown RBP13.49□□□□□ -0.25
DDX54-203ENST00000546869 MTERF3Q96E29 417 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 SENP5Q96HI0 755 aaPredicted RBP13.49□□□□□ -0.25
DDX54-203ENST00000546869 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 EBPLQ9BY08 206 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 EPS8L2Q9H6S3 715 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 MEAF6Q9HAF1 191 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 ZNF71Q9NQZ8 489 aaPredicted RBP13.49□□□□□ -0.25
DDX54-203ENST00000546869 INTS9Q9NV88 658 aaKnown RBP13.49□□□□□ -0.25
DDX54-203ENST00000546869 PNPOQ9NVS9 261 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 STMN3Q9NZ72 180 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 ZNF780BQ9Y6R6 833 aa13.49□□□□□ -0.25
DDX54-203ENST00000546869 PIEZO2Q9H5I5 2752 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ATP6AP2A0A1C7CYW4 349 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 TRPC5OSA6NMA1 111 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 HDAC3O15379 428 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 OR10H2O60403 315 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 PEX11AO75192 247 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 SKAP2O75563 359 aaPredicted RBP13.48□□□□□ -0.25
DDX54-203ENST00000546869 ATP6AP2O75787 350 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 ZFAND5O76080 213 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 JUNP05412 331 aaKnown RBP13.48□□□□□ -0.25
DDX54-203ENST00000546869 BCKDHAP12694 445 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 SDC1P18827 310 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 NR1D1P20393 614 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 TACR1P25103 407 aa13.48□□□□□ -0.25
DDX54-203ENST00000546869 RPL38P63173 70 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms