RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 C12orf45Q8N5I9 185 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 OR52N2Q8NGI0 321 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 SLC22A18Q96BI1 424 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ADAD1Q96M93 576 aaKnown RBP12.28□□□□□ -0.44
PTCH1-212ENST00000546744 TBX5Q99593 518 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 CCM2Q9BSQ5 444 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 ABRACLQ9P1F3 81 aa12.28□□□□□ -0.44
PTCH1-212ENST00000546744 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 MEGF11A6BM72 1044 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 POLR1CO15160 346 aaPredicted RBP12.27□□□□□ -0.44
PTCH1-212ENST00000546744 OR1F1O43749 312 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 RDH16O75452 317 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 VIPP01282 170 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 C1QBP02746 253 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 ALPPL2P10696 532 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 ITPKBP27987 946 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 CD79BP40259 229 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 STEAP3Q658P3 488 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF529Q6P280 563 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 LBX2Q6XYB7 198 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 CHST9Q7L1S5 443 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 THOC6Q86W42 341 aaKnown RBP12.27□□□□□ -0.44
PTCH1-212ENST00000546744 WDSUB1Q8N9V3 476 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 KATNBL1Q9H079 304 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 WASH6PQ9NQA3 447 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 INPP5EQ9NRR6 644 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 POU2F3Q9UKI9 436 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 PCDHB14Q9Y5E9 798 aa12.27□□□□□ -0.44
PTCH1-212ENST00000546744 COL11A2P13942 1736 aaPredicted RBP12.27□□□□□ -0.44
PTCH1-212ENST00000546744 ACOT8O14734 319 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 KCNE1P15382 129 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 KCNA5P22460 613 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 AVPR1BP47901 424 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 TAS2R31P59538 309 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 VLDLRP98155 873 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 MC2RQ01718 297 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 SF1Q15637 639 aaKnown RBP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 PRAMEF14Q5SWL7 426 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 ENPP6Q6UWR7 440 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 LYSMD2Q8IV50 215 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 CADM3Q8N126 398 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 UMODL1-AS1Q8N2C9 162 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 TERB2Q8NHR7 220 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 OR5B12Q96R08 314 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 TAPBPLQ9BX59 468 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 STRA6Q9BX79 667 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 CCDC86Q9H6F5 360 aaKnown RBP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 ASAH2Q9NR71 780 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 C13orf42A0A1B0GVH6 325 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 GXYLT2A0PJZ3 443 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 CSF1P09603 554 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 POLR2CP19387 275 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 MAOAP21397 527 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 HLA-DMAP28067 261 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 PDHA2P29803 388 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 TIA1P31483 386 aaKnown RBP eCLIP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 GRIN2CQ14957 1233 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 DPY19L2P1Q6NXN4 242 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 KCTD18Q6PI47 426 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 ZNF783Q6ZMS7 281 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 TPGS1Q6ZTW0 290 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 NRARPQ7Z6K4 114 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 ISCA2Q86U28 154 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 SLC7A6Q92536 515 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 C3orf49Q96BT1 292 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 B3GNT4Q9C0J1 378 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 GSTO2Q9H4Y5 243 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 ZBTB20Q9HC78 741 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-212ENST00000546744 ACSL6Q9UKU0 697 aa12.27□□□□□ -0.45
PTCH1-212ENST00000546744 MYBPHLA2RUH7 354 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 PHYHO14832 338 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 TPST2O60704 377 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 PROS1P07225 676 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SRCP12931 536 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 PCGF2P35227 344 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 GLP1RP43220 463 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 NUMBP49757 651 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 C1QTNF8P60827 252 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 TEKQ02763 1124 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 MLLT1Q03111 559 aaPredicted RBP12.26□□□□□ -0.45
PTCH1-212ENST00000546744 TEX26Q8N6G2 289 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ACBD4Q8NC06 268 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 OR51G2Q8NGK0 314 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SUN3Q8TAQ9 357 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 CLEC4CQ8WTT0 213 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SMPDL3AQ92484 453 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 NDRG1Q92597 394 aaKnown RBP12.26□□□□□ -0.45
PTCH1-212ENST00000546744 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SLC2A13Q96QE2 648 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 SLC22A14Q9Y267 594 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 RNF11Q9Y3C5 154 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 LAMB1P07942 1786 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 PRAMEF11O60813 436 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 GLUD1P00367 558 aa12.26□□□□□ -0.45
PTCH1-212ENST00000546744 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms