RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 AGTRAPQ6RW13 159 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 QSOX2Q6ZRP7 698 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 OTOP2Q7RTS6 562 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 BPHLQ86WA6 291 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 APCDD1Q8J025 514 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 SLC37A3Q8NCC5 494 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 OR8H1Q8NGG4 311 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TMEM163Q8TC26 289 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 OVCA2Q8WZ82 227 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 HYLS1Q96M11 299 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 MARVELD1Q9BSK0 173 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 C2orf49Q9BVC5 232 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 NARFLQ9H6Q4 476 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 PPP1R3EQ9H7J1 279 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 B3GAT2Q9NPZ5 323 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 LOC102723532A0A0G2JNH3 316 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 ARHGEF33A8MVX0 844 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 C5orf58C9J3I9 102 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 KPNA5O15131 536 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 PRKYO43930 277 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 MTX2O75431 263 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 GSTM1P09488 218 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 FURINP09958 794 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TNNI3P19429 210 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 EVI2BP34910 448 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 ABATP80404 500 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 C2orf80Q0P641 193 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 FLYWCH1Q4VC44 716 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 RPS26P11Q5JNZ5 115 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 RTP2Q5QGT7 225 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 REEP3Q6NUK4 255 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 METAP1DQ6UB28 335 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 USP45Q70EL2 814 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 UFD1Q92890 307 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 OMA1Q96E52 524 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 ALG14Q96F25 216 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TEFMQ96QE5 360 aaKnown RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 OR4K3Q96R72 315 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 LYSMD1Q96S90 227 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 KLF16Q9BXK1 252 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 GALNT9Q9HCQ5 603 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 TRPM5Q9NZQ8 1165 aa13.51□□□□□ -0.25
SRP54-202ENST00000546080 DNMT3AQ9Y6K1 912 aaPredicted RBP13.51□□□□□ -0.25
SRP54-202ENST00000546080 PLXNB3Q9ULL4 1909 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 ISM1B1AKI9 464 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 H7C4K7 107 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 LRRTM2O43300 516 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 H1F0P07305 194 aaKnown RBP13.5□□□□□ -0.25
SRP54-202ENST00000546080 ACADMP11310 421 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 UBL4AP11441 157 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 RPL3P39023 403 aaKnown RBP13.5□□□□□ -0.25
SRP54-202ENST00000546080 MAPK12P53778 367 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 CYP4F8P98187 520 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 ANGPT1Q15389 498 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 MPEG1Q2M385 716 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 PGBD2Q6P3X8 592 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 DNAJA4Q8WW22 397 aaPredicted RBP13.5□□□□□ -0.25
SRP54-202ENST00000546080 AP2M1Q96CW1 435 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 TM9SF2Q99805 663 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 SOSTQ9BQB4 213 aa13.5□□□□□ -0.25
SRP54-202ENST00000546080 STOX2Q9P2F5 926 aaPredicted RBP13.5□□□□□ -0.25
SRP54-202ENST00000546080 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 INMT-MINDY4F8WBC2 141 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 DDX5P17844 614 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 CSNK1DP48730 415 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 PTSQ03393 145 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 OR2G6Q5TZ20 316 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 ZNF57Q68EA5 555 aaPredicted RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 TYW3Q6IPR3 259 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 MED27Q6P2C8 311 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 FUT10Q6P4F1 479 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 DEF8Q6ZN54 512 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 COMMD6Q7Z4G1 85 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 TMPRSS11BQ86T26 416 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 HS6ST3Q8IZP7 471 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 C9orf62Q8N4C0 152 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 FAM26EQ8N5C1 309 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 ANKK1Q8NFD2 765 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 TM9SF4Q92544 642 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 LRR1Q96L50 414 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 POLDIP3Q9BY77 421 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.49□□□□□ -0.25
SRP54-202ENST00000546080 TESQ9UGI8 421 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 CD84Q9UIB8 345 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 PHF11Q9UIL8 331 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 SF3B6Q9Y3B4 125 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 TEX51A0A1B0GUA7 166 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 SAP18O00422 153 aaKnown RBP13.49□□□□□ -0.25
SRP54-202ENST00000546080 BCHEP06276 602 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 NAT1P18440 290 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 LHCGRP22888 699 aa13.49□□□□□ -0.25
SRP54-202ENST00000546080 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.258e-9■■■■□ 22.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms