RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ABHD11Q8NFV4 315 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SNIP1Q8TAD8 396 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 SLC22A18Q96BI1 424 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 LGALS12Q96DT0 336 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 ZNF285Q96NJ3 590 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 C17orf62Q9BQA9 187 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 NAA50Q9GZZ1 169 aaKnown RBP5.53□□□□□ -1.52
VPS50-220ENST00000544910 CERS4Q9HA82 394 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 SOHLH2Q9NX45 425 aa5.53□□□□□ -1.52
VPS50-220ENST00000544910 TRBV23OR9-2A0A075B6M9 112 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 A0A1B0GTL3 188 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 NDUFB5O43674 189 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SAGP10523 405 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 IFI30P13284 250 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 CEBPBP17676 345 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TNFRSF1BP20333 461 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 EIF4EBP2Q13542 120 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 WSCD2Q2TBF2 565 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 LRIF1Q5T3J3 769 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 COX18Q8N8Q8 333 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 F2RL3Q96RI0 385 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 FEVQ99581 238 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SLC30A2Q9BRI3 323 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 GABARAPL1Q9H0R8 117 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 ZBP1Q9H171 429 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 CARS2Q9HA77 564 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 CTPS2Q9NRF8 586 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 RABL2BQ9UNT1 228 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 KCNK6Q9Y257 313 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 OR10H1Q9Y4A9 318 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 HEMK1Q9Y5R4 338 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 ASPDHA6ND91 283 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 LRRC72A6NJI9 287 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 CPSF4LA6NMK7 179 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 H0YIV9 168 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 FZD6O60353 706 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SEC14L2O76054 403 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 STSP08842 583 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 C8orf89P0DMQ9 161 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 DRD2P14416 443 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 DDCP20711 480 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 OPRL1P41146 370 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 CCR4P51679 360 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 PFN3P60673 137 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 NCS1P62166 190 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 RPS26P62854 115 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 ST3GAL3Q11203 375 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 ELAVL3Q14576 367 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 IER5LQ5T953 404 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 HLA-DQA1Q5Y7H0 255 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 RFLNAQ6ZTI6 216 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 OR2A12Q8NGT7 310 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 OR2L2Q8NH16 312 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 HMGCLL1Q8TB92 370 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 AKAP1Q92667 903 aaKnown RBP eCLIP5.52□□□□□ -1.53
VPS50-220ENST00000544910 CREB3L1Q96BA8 519 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 FRMD6Q96NE9 622 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 LMAN2LQ9H0V9 348 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TBC1D17Q9HA65 648 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 ABCB9Q9NP78 766 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 RABL2AQ9UBK7 228 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 MAB21L2Q9Y586 359 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 ZNF236Q9UL36 1845 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TRBV5-4A0A0C4DH59 114 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TEX46H3BTG2 121 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 TLX2O43763 284 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 ZNF821O75541 412 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 APOC1P02654 83 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 PIM1P11309 404 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 PSKH1P11801 424 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 AZGP1P25311 298 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 RPS3AP61247 264 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 NKX3-2P78367 333 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 GRIN2CQ14957 1233 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 CLEC12AQ5QGZ9 265 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 LIPIQ6XZB0 460 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 GAREM2Q75VX8 874 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 C6orf120Q7Z4R8 191 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 IGFN1Q86VF2 1251 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 NRROSQ86YC3 692 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SUN3Q8TAQ9 357 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 AHCYL2Q96HN2 611 aaKnown RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 LYSMD1Q96S90 227 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 C19orf43Q9BQ61 176 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 XKR8Q9H6D3 395 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 RDH8Q9NYR8 311 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 SEC14L4Q9UDX3 406 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 GPN3Q9UHW5 284 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 PPT2Q9UMR5 302 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 B3GNT3Q9Y2A9 372 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 ANHXE9PGG2 379 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 FOXE1O00358 373 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 ADAP00813 363 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 LAMP2P13473 410 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 AKT2P31751 481 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 GUCA1AP43080 201 aaPredicted RBP5.52□□□□□ -1.53
VPS50-220ENST00000544910 NRIP1P48552 1158 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 DEFA5Q01523 94 aa5.52□□□□□ -1.53
VPS50-220ENST00000544910 AAK1Q2M2I8 961 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms