RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SEMA4GQ9NTN9 838 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 MAGEL2Q9UJ55 1249 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 RNF103-CHMP3A0A140T963 221 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 H0Y3Z8 333 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 NCK1P16333 377 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 GGT1P19440 569 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 GPC1P35052 558 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 XKP51811 444 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 MVDP53602 400 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 CYP51A1Q16850 503 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 YOD1Q5VVQ6 348 aaPredicted RBP28.65■■■□□ 2.18
CCM2-219ENST00000544363 GLYATQ6IB77 296 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 TTLL10Q6ZVT0 673 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 OR52N2Q8NGI0 321 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 ADAMTS18Q8TE60 1221 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 MVB12AQ96EY5 273 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 DPH2Q9BQC3 489 aaPredicted RBP28.65■■■□□ 2.18
CCM2-219ENST00000544363 NDC1Q9BTX1 674 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 RAD21L1Q9H4I0 556 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 S100A14Q9HCY8 104 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 ZNF749O43361 778 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 RCN1Q15293 331 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 SNCBQ16143 134 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 DDX59Q5T1V6 619 aaKnown RBP eCLIP28.65■■■□□ 2.18
CCM2-219ENST00000544363 CPZQ66K79 652 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 ANGPTL8Q6UXH0 198 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 ENDOVQ8N8Q3 282 aaKnown RBP28.65■■■□□ 2.18
CCM2-219ENST00000544363 PYDC1Q8WXC3 89 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 SPATA9Q9BWV2 254 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 GPATCH2Q9NW75 528 aa28.65■■■□□ 2.18
CCM2-219ENST00000544363 AQP12BA6NM10 295 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 GSTA4O15217 222 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 KCNK5O95279 499 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 C8BP07358 591 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 ARSFP54793 590 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 MAT1AQ00266 395 aaKnown RBP28.64■■■□□ 2.18
CCM2-219ENST00000544363 VAC14Q08AM6 782 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 SPDYE7PQ495Y7 208 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 PHF19Q5T6S3 580 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 SAXO2Q658L1 398 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 SPPL2CQ8IUH8 684 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 NAXDQ8IW45 347 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 OR4N5Q8IXE1 308 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 AQP12AQ8IXF9 295 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 LRRC25Q8N386 305 aaPredicted RBP28.64■■■□□ 2.18
CCM2-219ENST00000544363 METTL27Q8N6F8 245 aaPredicted RBP28.64■■■□□ 2.18
CCM2-219ENST00000544363 NEURL3Q96EH8 262 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 CHST8Q9H2A9 424 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 SEMA3GQ9NS98 782 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 NKX1-2Q9UD57 310 aaPredicted RBP28.64■■■□□ 2.18
CCM2-219ENST00000544363 HCN4Q9Y3Q4 1203 aa28.64■■■□□ 2.18
CCM2-219ENST00000544363 TMEM184BQ9Y519 407 aaPredicted RBP28.64■■■□□ 2.18
CCM2-219ENST00000544363 TCRBV3S1A0A5B6 114 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 GMNNO75496 209 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 CCT3P49368 545 aaKnown RBP28.63■■■□□ 2.17
CCM2-219ENST00000544363 AP2B1P63010 937 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 MRPS22P82650 360 aaKnown RBP28.63■■■□□ 2.17
CCM2-219ENST00000544363 RHDQ02161 417 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 FOLH1Q04609 750 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 TRA2AQ13595 282 aaKnown RBP eCLIP28.63■■■□□ 2.17
CCM2-219ENST00000544363 PRAMEF17Q5VTA0 474 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 PEX11GQ96HA9 241 aa28.63■■■□□ 2.17
CCM2-219ENST00000544363 RSRC1Q96IZ7 334 aaKnown RBP28.63■■■□□ 2.17
CCM2-219ENST00000544363 BLACEA4D250 179 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 FGF17O60258 216 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 LDB3O75112 727 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 GPR75O95800 540 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 ALAS2P22557 587 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 CRATP43155 626 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 FADDQ13158 208 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 CSRP2Q16527 193 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 COX20Q5RI15 118 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 ERICH5Q6P6B1 374 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 TMEM64Q6YI46 380 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 RNF130Q86XS8 419 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 ZZZ3Q8IYH5 903 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 TMEM121BQ9BXQ6 578 aaPredicted RBP28.62■■■□□ 2.17
CCM2-219ENST00000544363 NDOR1Q9UHB4 597 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 CDC14AQ9UNH5 594 aa28.62■■■□□ 2.17
CCM2-219ENST00000544363 CPMP14384 443 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 PORP16435 677 aaPredicted RBP28.61■■■□□ 2.17
CCM2-219ENST00000544363 ZFP36L1Q07352 338 aaKnown RBP28.61■■■□□ 2.17
CCM2-219ENST00000544363 SYT16Q17RD7 645 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 PTOV1Q86YD1 416 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 OR6C1Q96RD1 312 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 GORASP2Q9H8Y8 452 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 SIDT1Q9NXL6 827 aaKnown RBP28.61■■■□□ 2.17
CCM2-219ENST00000544363 DHCR7Q9UBM7 475 aaKnown RBP28.61■■■□□ 2.17
CCM2-219ENST00000544363 MRPS33Q9Y291 106 aaKnown RBP28.61■■■□□ 2.17
CCM2-219ENST00000544363 MAP4K5Q9Y4K4 846 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 DSCR3O14972 297 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 B4GALT2O60909 372 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 ADRM1Q16186 407 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 ZFP1Q6P2D0 407 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 C6orf120Q7Z4R8 191 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 OR9A2Q8NGT5 310 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 OR51Q1Q8NH59 317 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 SFXN5Q8TD22 340 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 FIG4Q92562 907 aa28.61■■■□□ 2.17
CCM2-219ENST00000544363 ANKRD9Q96BM1 317 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms