RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TICAM1Q8IUC6 712 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 AMER2Q8N7J2 671 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 C7orf57Q8NEG2 295 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 ACTRT2Q8TDY3 377 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 EXOSC8Q96B26 276 aaKnown RBP12.75□□□□□ -0.37
SP140-213ENST00000543928 DGAT2Q96PD7 388 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 EBF4Q9BQW3 602 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 ADAP2Q9NPF8 381 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 FAM53CQ9NYF3 392 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 MED13Q9UHV7 2174 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 EXO1Q9UQ84 846 aaKnown RBP12.75□□□□□ -0.37
SP140-213ENST00000543928 KCNMB2Q9Y691 235 aa12.75□□□□□ -0.37
SP140-213ENST00000543928 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 OR10H2O60403 315 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ALDOCP09972 364 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 CPMP14384 443 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 TNNI3P19429 210 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 FEN1P39748 380 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 PLIN5Q00G26 463 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ELAVL1Q15717 326 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 TBR1Q16650 682 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ZNF750Q32MQ0 723 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 LSM12Q3MHD2 195 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 BORAQ6PGQ7 559 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 SPATA19Q7Z5L4 167 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ST13P4Q8IZP2 240 aaPredicted RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 KRTCAP2Q8N6L1 136 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 CEP70Q8NHQ1 597 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 RFWD2Q8NHY2 731 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 PPWD1Q96BP3 646 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 CNRIP1Q96F85 164 aaPredicted RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 RBM18Q96H35 190 aaKnown RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 IMMP1LQ96LU5 166 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
SP140-213ENST00000543928 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ING2Q9H160 280 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 REEP4Q9H6H4 257 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ATP13A2Q9NQ11 1180 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 TCF7L2Q9NQB0 619 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 ZNF780BQ9Y6R6 833 aa12.74□□□□□ -0.37
SP140-213ENST00000543928 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 MGAQ8IWI9 3026 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 SAGE2PA6NJ88 616 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 C17orf105B2RV13 164 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 DNAJB5O75953 348 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 ITGB2P05107 769 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 CELA2AP08217 269 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 SLC35E2P0CK97 266 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 TROVE2P10155 538 aaKnown RBP eCLIP12.73□□□□□ -0.37
SP140-213ENST00000543928 COX7A2P14406 83 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 PORP16435 677 aaPredicted RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 CSNK2A2P19784 350 aaPredicted RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 HPCAL1P37235 193 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 SLC26A5P58743 744 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 Q0VFX4 171 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 AIMP2Q13155 320 aaKnown RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 PDE7AQ13946 482 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 TERF2Q15554 542 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 BTBD16Q32M84 506 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 ANKRD26P1Q6NSI1 321 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 DGAT2L6Q6ZPD8 337 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 R3HCC1LQ7Z5L2 792 aaKnown RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 APLFQ8IW19 511 aaPredicted RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 OR14A16Q8NHC5 309 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 PTPMT1Q8WUK0 201 aaPredicted RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 EXTL1Q92935 676 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 PPCDCQ96CD2 204 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 MARK4Q96L34 752 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 ZNF681Q96N22 645 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 SIKE1Q9BRV8 207 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 PELOQ9BRX2 385 aaKnown RBP12.73□□□□□ -0.37
SP140-213ENST00000543928 SLC35C2Q9NQQ7 365 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 GIMAP4Q9NUV9 329 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 AIG1Q9NVV5 245 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 TAS2R7Q9NYW3 318 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 ENTPD4Q9Y227 616 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 CLCA3PQ9Y6N3 262 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 LOC400499M0QZD8 3231 aa12.73□□□□□ -0.37
SP140-213ENST00000543928 A0A0G2JND7 137 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 GABRR3A8MPY1 467 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 E9PBE3 544 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 SCAMP2O15127 329 aaKnown RBP12.72□□□□□ -0.37
SP140-213ENST00000543928 UBDO15205 165 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 KLHL41O60662 606 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 TBX19O60806 448 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 PRPS1L1P21108 318 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 ITGA3P26006 1051 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 CCL11P51671 97 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 PGDP52209 483 aa12.72□□□□□ -0.37
SP140-213ENST00000543928 CLDN8P56748 225 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms