RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 POLKQ9UBT6 870 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 TBK1Q9UHD2 729 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 SNX6Q9UNH7 406 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 U3KQV3 271 aa3.79□□□□□ -1.8
SNHG1-217ENST00000541578 CARMIL3Q8ND23 1372 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 UBE4BO95155 1302 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 RNF123Q5XPI4 1314 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CDHR2Q9BYE9 1310 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ANTXRLA6NF34 631 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 PRAC2D3DTV9 90 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 H0YCG3 227 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CCL24O00175 119 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CHEK1O14757 476 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 SLC22A2O15244 555 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CLDN3O15551 220 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 SYT7O43581 403 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 EXTL3O43909 919 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 GMFGO60234 142 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 KIF5CO60282 957 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 IGLV2-11P01706 119 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CXCL10P02778 98 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ATP1B1P05026 303 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 SERPINF2P08697 491 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 IGHV4-31P0DP07 118 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 SKILP12757 684 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 PRG2P13727 222 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 GNSP15586 552 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CAPN2P17655 700 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TNNI3P19429 210 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 DGKAP23743 735 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 DNAJB1P25685 340 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 RBMS1P29558 406 aaKnown RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ADSSP30520 456 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TRPC1P48995 793 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ILF3Q12906 894 aaKnown RBP eCLIP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TRIM29Q14134 588 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 GK2Q14410 553 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 RBM39Q14498 530 aaKnown RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ZC2HC1CQ53FD0 456 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 RIPPLY2Q5TAB7 128 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF530Q6P9A1 599 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 C17orf107Q6ZR85 190 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 C15orf52Q6ZUT6 534 aaKnown RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 C1orf186Q6ZWK4 172 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 FCRLAQ7L513 359 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TDHQ8IZJ6 230 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CCDC185Q8N715 623 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 MAPKAPK5-AS1Q8N8E1 139 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TRPV3Q8NET8 790 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 GPRC5AQ8NFJ5 357 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 OR56B1Q8NGI3 324 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 OR13A1Q8NGR1 328 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 OR13C5Q8NGS8 318 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 SORCS1Q8WY21 1168 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ARHGAP45Q92619 1136 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 DCPSQ96C86 337 aaKnown RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 SCRN2Q96FV2 425 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 RPGRIP1Q96KN7 1286 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ZNF354BQ96LW1 612 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 COQ7Q99807 217 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TEX13BQ9BXU2 312 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 WWTR1Q9GZV5 400 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 COQ10BQ9H8M1 238 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 VIPAS39Q9H9C1 493 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 EBF2Q9HAK2 575 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TBC1D13Q9NVG8 400 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 OR6C2Q9NZP2 312 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 TMOD2Q9NZR1 351 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 FLRT3Q9NZU0 649 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ERVK-18Q9QC07 812 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 DBF4Q9UBU7 674 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 CHMP2BQ9UQN3 213 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ENTPD4Q9Y227 616 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ETV7Q9Y603 341 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.78□□□□□ -1.8
SNHG1-217ENST00000541578 ADAMTSL1Q8N6G6 1762 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 A0A0C4DFX4 3053 aa3.78□□□□□ -1.8
SNHG1-217ENST00000541578 KDRP35968 1356 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 THSD7BQ9C0I4 1608 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CTAGE9A4FU28 777 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 TCP10L2B9ZVM9 353 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 BMPR1BO00238 502 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 FPGTO14772 594 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 MCF2LO15068 1137 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 NME2P1O60361 137 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 GLRA3O75311 464 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 STBD1O95210 358 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 SYNGR4O95473 234 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CTAGE8P0CG41 777 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CALCBP10092 127 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 AKT2P31751 481 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 EPS15P42566 896 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 ALDH3B1P43353 468 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 TNFSF10P50591 281 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 CDR2Q01850 454 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 SPP2Q13103 211 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 GPR17Q13304 367 aa3.77□□□□□ -1.81
SNHG1-217ENST00000541578 RAPSNQ13702 412 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms