RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 HCRTR1O43613 425 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 MAN1A2O60476 641 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 E2F6O75461 281 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 EPN2O95208 641 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 CER1O95813 267 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 C6orf47O95873 294 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ABCB1P08183 1280 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 SMIM10L1P0DMW3 83 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ALOX12P18054 663 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 FXNQ16595 210 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZBTB49Q6ZSB9 765 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 MCATQ8IVS2 390 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 NATD1Q8N6N6 113 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ZNF764Q96H86 408 aaPredicted RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 SMIM10Q96HG1 83 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 COX4I2Q96KJ9 171 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 KAT8Q9H7Z6 458 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 SOHLH2Q9NX45 425 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 LYARQ9NX58 379 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 C5AR2Q9P296 337 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 WARS2Q9UGM6 360 aaKnown RBP8.22□□□□□ -1.09
THBS3-210ENST00000541576 GMEB2Q9UKD1 530 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 VPS4AQ9UN37 437 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 ATG4BQ9Y4P1 393 aa8.22□□□□□ -1.09
THBS3-210ENST00000541576 A0A1W2PRB8 838 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 TCRBV3S1A0A5B6 114 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 SH3PXD2BA1X283 911 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 EVPLLA8MZ36 301 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 B4GAT1O43505 415 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 SIGLEC6O43699 453 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 SYPP08247 313 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 HTR1EP28566 365 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 GZMMP51124 257 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 HBA1P69905 142 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 RHDQ02161 417 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 NR0B2Q15466 257 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 TRIM16LQ309B1 348 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 PLXDC1Q8IUK5 500 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 DNAJC22Q8N4W6 341 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 OR6C4Q8NGE1 309 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 OR2I1PQ8NGU4 316 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 SLC35B4Q969S0 331 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 CCDC74AQ96AQ1 378 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 EXOSC8Q96B26 276 aaKnown RBP8.21□□□□□ -1.09
THBS3-210ENST00000541576 SLCO4A1Q96BD0 722 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 SERINC2Q96SA4 455 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 POLR1BQ9H9Y6 1135 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 POLE4Q9NR33 117 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 STARD5Q9NSY2 213 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 EHD3Q9NZN3 535 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 ACTR3BQ9P1U1 418 aa8.21□□□□□ -1.09
THBS3-210ENST00000541576 ZNF282Q9UDV7 671 aaPredicted RBP8.21□□□□□ -1.09
THBS3-210ENST00000541576 IGHV5-51A0A0C4DH38 117 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 A0A1W2PR48 441 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 CLIC1O00299 241 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 PDPK1O15530 556 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 B3GALT2O43825 422 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 SRPX2O60687 465 aaPredicted RBP8.21□□□□□ -1.1
THBS3-210ENST00000541576 C9P02748 559 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 C8BP07358 591 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 MLLT3P42568 568 aaPredicted RBP8.21□□□□□ -1.1
THBS3-210ENST00000541576 LSM3P62310 102 aaKnown RBP8.21□□□□□ -1.1
THBS3-210ENST00000541576 USP53Q70EK8 1073 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 ERI1Q8IV48 349 aaKnown RBP8.21□□□□□ -1.1
THBS3-210ENST00000541576 DTWD1Q8N5C7 304 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 BPIFB6Q8NFQ5 453 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 OR2T12Q8NG77 320 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 GOT1L1Q8NHS2 421 aaPredicted RBP8.21□□□□□ -1.1
THBS3-210ENST00000541576 ISOC1Q96CN7 298 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 PLEKHA8Q96JA3 519 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 MAPKAP1Q9BPZ7 522 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 TRIM15Q9C019 465 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 MUC13Q9H3R2 512 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 MARCH7Q9H992 704 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 TPT1P8Q9HAU6 139 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 PDE7BQ9NP56 450 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 TAS2R9Q9NYW1 312 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 TAS2R7Q9NYW3 318 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 DAPK2Q9UIK4 370 aa8.21□□□□□ -1.1
THBS3-210ENST00000541576 MRPS2Q9Y399 296 aaKnown RBP8.21□□□□□ -1.1
THBS3-210ENST00000541576 C1orf226A1L170 272 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CPED1A4D0V7 1026 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 PRKRAO75569 313 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 SERPINB7O75635 380 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 AIFM1O95831 613 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 ENGP17813 658 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CLCN2P51788 898 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 GAB1Q13480 694 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 LCN8Q6JVE9 175 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 SPRED1Q7Z699 444 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CALHM3Q86XJ0 350 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 CARFQ8N187 725 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 FAM181AQ8N9Y4 354 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 FAM120BQ96EK7 910 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 GTPBP2Q9BX10 602 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 CHRNA10Q9GZZ6 450 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 RPF2Q9H7B2 306 aaKnown RBP8.2□□□□□ -1.1
THBS3-210ENST00000541576 SLAMF7Q9NQ25 335 aa8.2□□□□□ -1.1
THBS3-210ENST00000541576 UTS2RQ9UKP6 389 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms