RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 TGFBR3LH3BV60 316 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 EBAG9O00559 213 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CFLARO15519 480 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PDPK1O15530 556 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CTNSO60931 367 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ALBP02768 609 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ZGLP1P0C6A0 271 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 T-ENOLP0DO92 83 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 HSD17B7P56937 341 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PCBP4P57723 403 aaKnown RBP17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DUSP2Q05923 314 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MINDY4Q4G0A6 757 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SHISA6Q6ZSJ9 500 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RETREG3Q86VR2 466 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ANKRD46Q86W74 232 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SCUBE1Q8IWY4 988 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 OR4K14Q8NGD5 310 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MIEF2Q96C03 454 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TAGLN3Q9UI15 199 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NDUFAF1Q9Y375 327 aa17.77■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NBEAQ8NFP9 2946 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DXOO77932 396 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GPR75O95800 540 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CCNYL3P0C7X3 344 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 DDX5P17844 614 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MAOAP21397 527 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FEN1P39748 380 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FRKP42685 505 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CPA2P48052 419 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SLC13A2Q13183 592 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CEBPEQ15744 281 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PAGE3Q5JUK9 113 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MFSD4BQ5TF39 518 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SLC2A7Q6PXP3 512 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CLECL1Q8IZS7 167 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NSL1Q96IY1 281 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SPSB2Q99619 263 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NECTIN3Q9NQS3 549 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 C14orf105Q9NVL8 296 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FAM120CQ9NX05 1096 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ZNF780BQ9Y6R6 833 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PTPRQQ9UMZ3 2332 aa17.76■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PRSS51A0A1B0GVH4 220 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MYO1GB0I1T2 1018 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 C9J4A7 227 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ANGPT2O15123 496 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RECKO95980 971 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PPP2R1BP30154 601 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 XKP51811 444 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PLIN5Q00G26 463 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RHAGQ02094 409 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 STX5Q13190 355 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MAP7Q14244 749 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NCF4Q15080 339 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ANXA8L1Q5VT79 327 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 QSOX2Q6ZRP7 698 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ESX1Q8N693 406 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SUN3Q8TAQ9 357 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RCN3Q96D15 328 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 PTCHD1Q96NR3 888 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 BBS4Q96RK4 519 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NPAS2Q99743 824 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 VN1R1Q9GZP7 353 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SOX17Q9H6I2 414 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 SERHLQ9NQF3 203 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GPN3Q9UHW5 284 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 LEF1Q9UJU2 399 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MKL2Q9ULH7 1088 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ERVK-11Q9UQG0 969 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ENTPD4Q9Y227 616 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MMACHCQ9Y4U1 282 aa17.75■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ITPR1Q14643 2758 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 A0A1W2PRB8 838 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 STMND1H3BQB6 276 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RNASET2O00584 256 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TLX3O43711 291 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 RAD1O60671 282 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 ESRRAP11474 423 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CPMP14384 443 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CSNK2A2P19784 350 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 IGLV3-21P80748 117 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MAPKAPK3Q16644 382 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MMEL1Q495T6 779 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 REP15Q6BDI9 236 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MSANTD1Q6ZTZ1 278 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CCDC116Q8IYX3 515 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NLGN4XQ8N0W4 816 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NATD1Q8N6N6 113 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 NLGN4YQ8NFZ3 816 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 CT55Q8WUE5 264 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GTF2H4Q92759 462 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 TSLPQ969D9 159 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 AMDHD1Q96NU7 426 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 INPP5KQ9BT40 448 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GLIPR2Q9H4G4 154 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 WDR54Q9H977 334 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 GIMAP4Q9NUV9 329 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 MAP10Q9P2G4 905 aa17.74■□□□□ 0.43
TNFRSF1A-213ENST00000540022 FER1L5A0AVI2 2057 aa17.73■□□□□ 0.43
TNFRSF1A-213ENST00000540022 IGKV3D-11A0A0A0MRZ8 115 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms