RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TMEM35AQ53FP2 167 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 NKAIN2Q5VXU1 208 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 COMTD1Q86VU5 262 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 NEURL3Q96EH8 262 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 RMND5BQ96G75 393 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-205ENST00000538545 DOHHQ9BU89 302 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 GPR27Q9NS67 375 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 POT1Q9NUX5 634 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 DMTF1Q9Y222 760 aa13.34□□□□□ -0.27
ACTN1-205ENST00000538545 H3BNH8 94 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 KDM1AO60341 852 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 RECKO95980 971 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ARAFP10398 606 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 PCSK2P16519 638 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 MYF6P23409 242 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 SERPINB1P30740 379 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 RPS15AP62244 130 aaKnown RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 PIGFQ07326 219 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 OR5K1Q8NHB7 308 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 UBE2FQ969M7 185 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 PNPLA3Q9NST1 481 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 RLIMQ9NVW2 624 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ADPRHL2Q9NX46 363 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 THUMPD1Q9NXG2 353 aaKnown RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ADAM29Q9UKF5 820 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 PILRAQ9UKJ1 303 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 CES1P1Q9UKY3 287 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 BAG5Q9UL15 447 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 DOLKQ9UPQ8 538 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 CACNA1EQ15878 2313 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ZNF217O75362 1048 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 KRT75O95678 551 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 HMGN2P05204 90 aaKnown RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 POU2F1P14859 743 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 FRKP42685 505 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 STXBP1P61764 594 aaKnown RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 LIN52Q52LA3 116 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 DCP2Q8IU60 420 aaKnown RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ARL10Q8N8L6 244 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 TSPAN14Q8NG11 270 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 VANGL1Q8TAA9 524 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-205ENST00000538545 SLC22A18Q96BI1 424 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ZFYVE21Q9BQ24 234 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 SARGQ9BW04 601 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 ZNF696Q9H7X3 374 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 TM9SF3Q9HD45 589 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 CTPS2Q9NRF8 586 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 FAM118AQ9NWS6 357 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 PCDHGA8Q9Y5G5 932 aa13.33□□□□□ -0.28
ACTN1-205ENST00000538545 A0A1W2PR77 199 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 C2orf74A8MZ97 194 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 AGXTP21549 392 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 FADDQ13158 208 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 MEP1AQ16819 746 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 SLC48A1Q6P1K1 146 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 TBC1D19Q8N5T2 526 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 METTL27Q8N6F8 245 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-205ENST00000538545 ZG16BQ96DA0 208 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 MSANTD3Q96H12 275 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 MAP3K3Q99759 626 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 FAIM2Q9BWQ8 316 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 RIBC2Q9H4K1 309 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 FSCN3Q9NQT6 498 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 MYRFQ9Y2G1 1151 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 FREM2Q5SZK8 3169 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 SLC9B1P1A6NJY1 282 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 SGK494L7N484 410 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 TLR4O00206 839 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 SEMA7AO75326 666 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 CD27P26842 260 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 CDH12P55289 794 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 GFERP55789 205 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 STARD6P59095 220 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 ZP2Q05996 745 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 RGS1Q08116 209 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.285e-6■■■□□ 17
ACTN1-205ENST00000538545 ARL14Q8N4G2 192 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 BAHD1Q8TBE0 780 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-205ENST00000538545 ARSGQ96EG1 525 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 PRR14Q9BWN1 585 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 TMEM38AQ9H6F2 299 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 MUTYHQ9UIF7 546 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 CELSR3Q9NYQ7 3312 aa13.32□□□□□ -0.28
ACTN1-205ENST00000538545 SLC28A2O43868 658 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CDC123O75794 336 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-205ENST00000538545 MED26O95402 600 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CDH3P22223 829 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 CPN2P22792 545 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 PEX19P40855 299 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 LIM2P55344 173 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 TEAD4Q15561 434 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 FAM111BQ6SJ93 734 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 LACC1Q8IV20 430 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 GPR32P1Q8NGA4 272 aa13.31□□□□□ -0.28
ACTN1-205ENST00000538545 OR4D11Q8NGI4 311 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms