RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	RBBP7	Q16576	425 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	C18orf21	Q32NC0	220 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	FBXO48	Q5FWF7	155 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	XKR6	Q5GH73	641 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	C3orf38	Q5JPI3	329 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PAGE2B	Q5JRK9	111 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	KIAA1614	Q5VZ46	1190 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	LCTL	Q6UWM7	567 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	CDHR3	Q6ZTQ4	885 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	FAM47E	Q6ZV65	393 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMPRSS9	Q7Z410	1059 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMPRSS11B	Q86T26	416 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	KRT78	Q8N1N4	520 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PRR18	Q8N4B5	295 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCNYL1	Q8N7R7	359 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR2A1	Q8NGT9	310 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR8K5	Q8NH50	307 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR56A3	Q8NH54	315 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	WDR36	Q8NI36	951 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	IL17D	Q8TAD2	202 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	TCP10L	Q8TDR4	215 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	UBTD2	Q8WUN7	234 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC5A11	Q8WWX8	675 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	DNAJC9	Q8WXX5	260 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	STMN2	Q93045	179 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	NEIL2	Q969S2	332 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ATP6V1E2	Q96A05	226 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZUFSP	Q96AP4	578 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	NXPE2	Q96DL1	559 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PPM1M	Q96MI6	270 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	FAM111A	Q96PZ2	611 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	TRAPPC9	Q96Q05	1148 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	AIF1L	Q9BQI0	150 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMEM79	Q9BSE2	394 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	DPH7	Q9BTV6	452 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ERVK-6	Q9BXR3	956 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	NLN	Q9BYT8	704 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC7A5P2	Q9GIP4	190 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	YIPF3	Q9GZM5	350 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	DRC3	Q9H069	523 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZNF768	Q9H5H4	540 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	DCLRE1B	Q9H816	532 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ACTR8	Q9H981	624 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	FGF21	Q9NSA1	209 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMEM184C	Q9NVA4	438 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PARPBP	Q9NWS1	579 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	GPRC5B	Q9NZH0	403 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PDP2	Q9P2J9	529 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ANKMY1	Q9P2S6	941 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC17A7	Q9P2U7	560 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	COPG2	Q9UBF2	871 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PISD	Q9UG56	409 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PTBP2	Q9UKA9	531 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	SNX7	Q9UNH6	387 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	SATB2	Q9UPW6	733 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC22A14	Q9Y267	594 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	BTRC	Q9Y297	605 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	LRCH1	Q9Y2L9	728 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PLLP	Q9Y342	182 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	LOXL2	Q9Y4K0	774 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	LRRC42	Q9Y546	428 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	PCNX2	A6NKB5	2137 aa		4.1	□□□□□ -1.75
SNHG1-208	ENST00000538266	ANKRD12	Q6UB98	2062 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	UNC13C	Q8NB66	2214 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	ASXL3	Q9C0F0	2248 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266		A0A0J9YVX5	310 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TRBC2	A0A5B9	178 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR2A25	A4D2G3	310 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266		B4E171	279 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TARM1	B6A8C7	271 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TMEM150C	B9EJG8	249 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266		E7EQ34	232 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266		G3V2L1	256 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	E2F3	O00716	465 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TXNDC9	O14530	226 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	POLR1C	O15160	346 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	CASC3	O15234	703 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TAPBP	O15533	448 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	ZSCAN9	O15535	394 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR1F1	O43749	312 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TYROBP	O43914	113 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	CCDC22	O60826	627 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	SKAP2	O75563	359 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	CRCP	O75575	148 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	CIB2	O75838	187 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	OR2B3	O76000	313 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	SUPT7L	O94864	414 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	SCAF4	O95104	1147 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	TNFSF15	O95150	251 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	SIX3	O95343	332 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	MLYCD	O95822	493 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	EIF2S1	P05198	315 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	LINGO3	P0C6S8	592 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	SLC35G6	P0C7Q6	338 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	EBLN1	P0CF75	366 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	C1GALT1C1L	P0DN25	315 aa		4.09	□□□□□ -1.75
SNHG1-208	ENST00000538266	HGF	P14210	728 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms