RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 LAPTM4BQ86VI4 370 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 EPHX3Q9H6B9 360 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 FKBP14Q9NWM8 211 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 HPF1Q9NWY4 346 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 IGLV3-10A0A075B6K4 115 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 ISPDA4D126 451 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 HHLA1C9JL84 531 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 EI24O14681 340 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 AP1G1O43747 822 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 STATHP02808 62 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 C8BP07358 591 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 MAGEA6P43360 314 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 ENTPD1P49961 510 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 CDH15P55291 814 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 SYCE2Q6PIF2 218 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 UBE2J2Q8N2K1 259 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 OR56A3Q8NH54 315 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 TANKQ92844 425 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 ARRDC3Q96B67 414 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 LRRC58Q96CX6 371 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 PISDQ9UG56 409 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 KCND3Q9UK17 655 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 TESMINQ9Y4I5 508 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 DDX60LQ5H9U9 1706 aaKnown RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 TRBC2A0A5B9 178 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 CPNE3O75131 537 aaKnown RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 C6orf47O95873 294 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 C8orf89P0DMQ9 161 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 CSNK1EP49674 416 aaKnown RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 GNG2P59768 71 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 PCBP2Q15366 365 aaKnown RBP eCLIP10.77□□□□□ -0.691e-6■■■□□ 14.6
AMBRA1-211ENST00000533727 FAM189A2Q15884 450 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC22A16Q86VW1 577 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 ENDOVQ8N8Q3 282 aaKnown RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 NUP43Q8NFH3 380 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 TOR1AIP2Q8NFQ8 470 aa10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 TSEN15Q8WW01 171 aaKnown RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 PRR11Q96HE9 360 aaPredicted RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 PTBP2Q9UKA9 531 aaKnown RBP10.77□□□□□ -0.69
AMBRA1-211ENST00000533727 CLPXO76031 633 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 CD36P16671 472 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 MNDAP41218 407 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 CDKN1CP49918 316 aaPredicted RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 MTPNP58546 118 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 MXD1Q05195 221 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 ADAM15Q13444 863 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 MADCAM1Q13477 382 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 EFR3AQ14156 821 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 RNASE12Q5GAN4 147 aaKnown RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 RBM48Q5RL73 367 aaKnown RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 C1orf189Q5VU69 101 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 MCATQ8IVS2 390 aaKnown RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 ZFPM2Q8WW38 1151 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 THRSPQ92748 146 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 C12orf43Q96C57 262 aaKnown RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 FCRL4Q96PJ5 515 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 BRF2Q9HAW0 419 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC35C2Q9NQQ7 365 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 MED11Q9P086 117 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 EIF3KQ9UBQ5 218 aaKnown RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 PSAT1Q9Y617 370 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 FAM189A1O60320 539 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 IL33O95760 270 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 IL3P08700 152 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 G6PDP11413 515 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 CDK4P11802 303 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 GNALP38405 381 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC15A1P46059 708 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 GPLD1P80108 840 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 CDKL1Q00532 357 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 CCSAPQ6IQ19 270 aaPredicted RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 AASSQ9UDR5 926 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 KDM4BO94953 1096 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 SLC9A3P48764 834 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 TRA2BP62995 288 aaKnown RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 DEFA5Q01523 94 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 KCNC4Q03721 635 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 TARDBPQ13148 414 aaKnown RBP eCLIP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 CDKN3Q16667 212 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 PDSS2Q86YH6 399 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 TEX26Q8N6G2 289 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 OR52E1Q8NGJ3 308 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 OR5AK3PQ8NH89 298 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 ARRDC2Q8TBH0 407 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 NT5C3BQ969T7 300 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 F2RL3Q96RI0 385 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 EVA1AQ9H8M9 152 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 LTB4R2Q9NPC1 389 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 TAS2R7Q9NYW3 318 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 FBXO9Q9UK97 447 aaPredicted RBP10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 ZNF451Q9Y4E5 1061 aa10.76□□□□□ -0.69
AMBRA1-211ENST00000533727 KCNK5O95279 499 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 CSTAP01040 98 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 ZDHHC11BP0C7U3 371 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 PSKH1P11801 424 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 MMP12P39900 470 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 PCDH1Q08174 1060 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 GALNT1Q10472 559 aaPredicted RBP10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 PCLAFQ15004 111 aa10.75□□□□□ -0.69
AMBRA1-211ENST00000533727 TRAM2Q15035 370 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms