RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 NTSP30990 170 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 PTGER1P34995 402 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
CTSB-222ENST00000531551 PCBP4P57723 403 aaKnown RBP16.56■□□□□ 0.24
CTSB-222ENST00000531551 MPEG1Q2M385 716 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 BLOC1S3Q6QNY0 202 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 VASH2Q86V25 355 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 ANKRD46Q86W74 232 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 FITM2Q8N6M3 262 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 OR2Y1Q8NGV0 311 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 FGF11Q92914 225 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 SPDL1Q96EA4 605 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 GPR87Q9BY21 358 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 BHLHE41Q9C0J9 482 aaPredicted RBP16.56■□□□□ 0.24
CTSB-222ENST00000531551 KCND3Q9UK17 655 aa16.56■□□□□ 0.24
CTSB-222ENST00000531551 SEC16AO15027 2179 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 FER1L5A0AVI2 2057 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 A8MUA0 341 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 TBX19O60806 448 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 SNRPB2P08579 225 aaKnown RBP16.55■□□□□ 0.24
CTSB-222ENST00000531551 PORP16435 677 aaPredicted RBP16.55■□□□□ 0.24
CTSB-222ENST00000531551 CSNK2A2P19784 350 aaPredicted RBP16.55■□□□□ 0.24
CTSB-222ENST00000531551 PTPN4P29074 926 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 NCBP2P52298 156 aaKnown RBP eCLIP16.55■□□□□ 0.24
CTSB-222ENST00000531551 MANFP55145 182 aaKnown RBP16.55■□□□□ 0.24
CTSB-222ENST00000531551 DUSP2Q05923 314 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 RCAN2Q14206 197 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 LANCL3Q6ZV70 420 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 MED25Q71SY5 747 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 TREML1Q86YW5 311 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 PLPP5Q8NEB5 264 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 OR8J2Q8NGG1 315 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 DOK4Q8TEW6 326 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 RBM18Q96H35 190 aaKnown RBP16.55■□□□□ 0.24
CTSB-222ENST00000531551 DGAT2Q96PD7 388 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 PNO1Q9NRX1 252 aaKnown RBP16.55■□□□□ 0.24
CTSB-222ENST00000531551 TAS2R7Q9NYW3 318 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 IL17BQ9UHF5 180 aa16.55■□□□□ 0.24
CTSB-222ENST00000531551 A0A1W2PRB8 838 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CFLARO15519 480 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 UMODP07911 640 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CPMP14384 443 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 TNNI3P19429 210 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CAPN3P20807 821 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 NT5EP21589 574 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 ADSLP30566 484 aaPredicted RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 MPIP34949 423 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 PHC1P78364 1004 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 SERTAD2Q14140 314 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CAMKMTQ7Z624 323 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 SNX32Q86XE0 403 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 SAMD14Q8IZD0 417 aaPredicted RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 LRRC25Q8N386 305 aaPredicted RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 POU5F2Q8N7G0 328 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 VPS37AQ8NEZ2 397 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 ZNF681Q96N22 645 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 SLAMF7Q9NQ25 335 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CELSR3Q9NYQ7 3312 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 SLC22A2O15244 555 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CPSF4O95639 269 aaKnown RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 ABCB1P08183 1280 aaPredicted RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 LIFP15018 202 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 OTX2P32243 289 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 HSPB3Q12988 150 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 MAPRE2Q15555 327 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 ANXA8L1Q5VT79 327 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CLECL1Q8IZS7 167 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 C8orf44Q96CB5 159 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 ZBED6CLQ96FA7 236 aaPredicted RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 MESP1Q9BRJ9 268 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 GLIPR2Q9H4G4 154 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CCDC86Q9H6F5 360 aaKnown RBP16.54■□□□□ 0.24
CTSB-222ENST00000531551 TMEM45AQ9NWC5 275 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 CLDN16Q9Y5I7 305 aa16.54■□□□□ 0.24
CTSB-222ENST00000531551 IGKV3D-11A0A0A0MRZ8 115 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 IGHV3-20A0A0C4DH32 117 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 MYO1GB0I1T2 1018 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 TERTO14746 1132 aaKnown RBP16.53■□□□□ 0.24
CTSB-222ENST00000531551 ANGPT2O15123 496 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 TLX3O43711 291 aaPredicted RBP16.53■□□□□ 0.24
CTSB-222ENST00000531551 C6orf47O95873 294 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 GPC1P35052 558 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 WNT3P56703 355 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 OR4D2P58180 307 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 CLN3Q13286 438 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 CYLC2Q14093 348 aaPredicted RBP16.53■□□□□ 0.24
CTSB-222ENST00000531551 TERF2Q15554 542 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 MAPKAPK3Q16644 382 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 MMEL1Q495T6 779 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 SLC2A7Q6PXP3 512 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 ZNF551Q7Z340 670 aaPredicted RBP16.53■□□□□ 0.24
CTSB-222ENST00000531551 ST13P4Q8IZP2 240 aaPredicted RBP16.53■□□□□ 0.24
CTSB-222ENST00000531551 NATD1Q8N6N6 113 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 ADCY4Q8NFM4 1077 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 OR9A2Q8NGT5 310 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 KCNE4Q8WWG9 221 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 SEMA3GQ9NS98 782 aa16.53■□□□□ 0.24
CTSB-222ENST00000531551 NDUFAF1Q9Y375 327 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms