RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 LRIT2A6NDA9 550 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 KDM4EB2RXH2 506 aaPredicted RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 CYR61O00622 381 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 H2AFYO75367 372 aaKnown RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 TRAPPC6AO75865 159 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 IFNA2P01563 188 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 TMIGD3P0DMS9 266 aaPredicted RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 PGAM1P18669 254 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 GCKP35557 465 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 MSH2P43246 934 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 PLA2G16P53816 162 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 MTTPP55157 894 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 TGM3Q08188 693 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 TRMT10BQ6PF06 316 aaKnown RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 ADGRD1Q6QNK2 874 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 SYDE1Q6ZW31 735 aaPredicted RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 THOC6Q86W42 341 aaKnown RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 KRT78Q8N1N4 520 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 OR2L5Q8NG80 312 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 OR10G3Q8NGC4 313 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 REXO4Q9GZR2 422 aaKnown RBP9.56□□□□□ -0.88
COPB1-207ENST00000529866 AICDAQ9GZX7 198 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 ACBD3Q9H3P7 528 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 CALHM2Q9HA72 323 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.56□□□□□ -0.88
COPB1-207ENST00000529866 ASIC3Q9UHC3 531 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 SPACA6W5XKT8 324 aa9.56□□□□□ -0.88
COPB1-207ENST00000529866 TP73O15350 636 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CLEC3AO75596 197 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CNOT4O95628 575 aaKnown RBP9.55□□□□□ -0.88
COPB1-207ENST00000529866 AHSGP02765 367 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 GNAZP19086 355 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CERS1P27544 350 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 HNRNPH1P31943 449 aaKnown RBP9.55□□□□□ -0.88
COPB1-207ENST00000529866 MASP1P48740 699 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CDK9P50750 372 aaKnown RBP9.55□□□□□ -0.88
COPB1-207ENST00000529866 DIO3P55073 304 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 EEF1A1P68104 462 aaKnown RBP9.55□□□□□ -0.88
COPB1-207ENST00000529866 PPP1R7Q15435 360 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 ACKR1Q16570 336 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 NHSL2Q5HYW2 709 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 EEF1A1P5Q5VTE0 462 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 PODNL1Q6PEZ8 512 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 SCIMPQ6UWF3 145 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 TMIGD1Q6UXZ0 262 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 LUZP2Q86TE4 346 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CNTN4Q8IWV2 1026 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 ZNF721Q8TF20 911 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 TMEM158Q8WZ71 300 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CERS2Q96G23 380 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 QRFPRQ96P65 431 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 DGAT2Q96PD7 388 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 GSX2Q9BZM3 304 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 ROGDIQ9GZN7 287 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 PITHD1Q9GZP4 211 aaPredicted RBP9.55□□□□□ -0.88
COPB1-207ENST00000529866 PIGMQ9H3S5 423 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 UBTD1Q9HAC8 227 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 LYRM4Q9HD34 91 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 ZNF226Q9NYT6 803 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CHMP2BQ9UQN3 213 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 SLC22A14Q9Y267 594 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 TESMINQ9Y4I5 508 aa9.55□□□□□ -0.88
COPB1-207ENST00000529866 CHCHD2Q9Y6H1 151 aaPredicted RBP9.55□□□□□ -0.88
COPB1-207ENST00000529866 MYOCOSA0A1B0GUC4 107 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ANKRD33BA6NCL7 494 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ANKDD1BA6NHY2 528 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 CAPN14A8MX76 684 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 TP53I11O14683 189 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 LDB3O75112 727 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 TRIM3O75382 744 aaPredicted RBP9.54□□□□□ -0.88
COPB1-207ENST00000529866 SNX4O95219 450 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ETHE1O95571 254 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 C1QAP02745 245 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 HPNP05981 417 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 C1GALT1C1LP0DN25 315 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 CYP4B1P13584 511 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 CPOXP36551 454 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ELK3P41970 407 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 KCNC1P48547 511 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 PLIN5Q00G26 463 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 DMTNQ08495 405 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 SLBPQ14493 270 aaKnown RBP eCLIP9.54□□□□□ -0.88
COPB1-207ENST00000529866 FASTKD3Q14CZ7 662 aaKnown RBP9.54□□□□□ -0.88
COPB1-207ENST00000529866 RPS6KA2Q15349 733 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 TOMM20Q15388 145 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ADPRMQ3LIE5 342 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 SPANXN3Q5MJ09 141 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 TEDDM1Q5T9Z0 273 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 VASNQ6EMK4 673 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 HMBOX1Q6NT76 420 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ABHD17CQ6PCB6 329 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 LYPD8Q6UX82 237 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 SLC29A4Q7RTT9 530 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 C9orf40Q8IXQ3 194 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 TAGAPQ8N103 731 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 ZNF441Q8N8Z8 693 aa9.54□□□□□ -0.88
COPB1-207ENST00000529866 C9orf106Q8NAJ2 232 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms