RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 NPIPA2E9PIF3 369 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 NPIPA5E9PKD4 350 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 NPIPA3F8WFD2 350 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ADAMDEC1O15204 470 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 RFPL2O75678 378 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 EDNRAP25101 427 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 TM4SF4P48230 202 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 SPANXN4Q5MJ08 99 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 KIAA1161Q6NSJ0 714 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 FAM111BQ6SJ93 734 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 C12orf45Q8N5I9 185 aaPredicted RBP10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ZNF565Q8N9K5 539 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 OR52B6Q8NGF0 335 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 MZB1Q8WU39 189 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 SAMD11Q96NU1 681 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 CASD1Q96PB1 797 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 NPIPA1Q9UND3 350 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 SULT1C2O00338 296 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 RPS17P08708 135 aaKnown RBP10.4□□□□□ -0.74
CPNE4-209ENST00000512055 PREPP48147 710 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 PDX1P52945 283 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ACTA2P62736 377 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ACTG2P63267 376 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ACTC1P68032 377 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ACTA1P68133 377 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 MAP4K2Q12851 820 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 PON3Q15166 354 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 SF1Q15637 639 aaKnown RBP10.4□□□□□ -0.74
CPNE4-209ENST00000512055 C6orf136Q5SQH8 315 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ZNF101Q8IZC7 436 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 BEND7Q8N7W2 519 aaPredicted RBP10.4□□□□□ -0.74
CPNE4-209ENST00000512055 RPLP0P6Q8NHW5 317 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 C15orf40Q8WUR7 153 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 STON2Q8WXE9 905 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 ARL11Q969Q4 196 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 TXN2Q99757 166 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 SLC28A3Q9HAS3 691 aa10.4□□□□□ -0.74
CPNE4-209ENST00000512055 RPL36Q9Y3U8 105 aaKnown RBP10.4□□□□□ -0.74
CPNE4-209ENST00000512055 CFAP20Q9Y6A4 193 aaKnown RBP10.4□□□□□ -0.74
CPNE4-209ENST00000512055 DCDC2BA2VCK2 349 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 AQP12BA6NM10 295 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 MAGEB17A8MXT2 336 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 PRSS44E7EML9 344 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 GPR39O43194 453 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 SPDEFO95238 335 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 CDK1P06493 297 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF648Q5T619 568 aaPredicted RBP10.4□□□□□ -0.75
CPNE4-209ENST00000512055 OR4F3Q6IEY1 312 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 CHSY3Q70JA7 882 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 TIPARPQ7Z3E1 657 aaKnown RBP10.4□□□□□ -0.75
CPNE4-209ENST00000512055 PDSS2Q86YH6 399 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 AQP12AQ8IXF9 295 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 CADM2Q8N3J6 435 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 GLB1L3Q8NCI6 653 aaPredicted RBP10.4□□□□□ -0.75
CPNE4-209ENST00000512055 NSMAFQ92636 917 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 EXOSC8Q96B26 276 aaKnown RBP10.4□□□□□ -0.75
CPNE4-209ENST00000512055 BOCQ9BWV1 1114 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 POPDC3Q9HBV1 291 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 ANKHQ9HCJ1 492 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 BACE2Q9Y5Z0 518 aa10.4□□□□□ -0.75
CPNE4-209ENST00000512055 SLC31A1O15431 190 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 FOXD2O60548 495 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-209ENST00000512055 APODP05090 189 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 LAMP2P13473 410 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 CBR1P16152 277 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 HTD2P86397 168 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 POU4F3Q15319 338 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 C18orf21Q32NC0 220 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-209ENST00000512055 ANKRD54Q6NXT1 300 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 BRAT1Q6PJG6 821 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 SLC9B2Q86UD5 537 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 SLC15A3Q8IY34 581 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 BEST3Q8N1M1 668 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 TMEM185AQ8NFB2 350 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 RHEBL1Q8TAI7 183 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 MITD1Q8WV92 249 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 CCDC32Q9BV29 185 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 SMURF2Q9HAU4 748 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 PHPT1Q9NRX4 125 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-209ENST00000512055 FAIMQ9NVQ4 179 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 ZIM2Q9NZV7 527 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 MGAT4BQ9UQ53 548 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 LDB2O43679 373 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 SCELO95171 688 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 TGFB1P01137 390 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 DCNP07585 359 aaKnown RBP10.39□□□□□ -0.75
CPNE4-209ENST00000512055 BDKRB1P46663 353 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 MAP2K3P46734 347 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 TLE1Q04724 770 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 FPGSQ05932 587 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 GNMTQ14749 295 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 FRG2Q64ET8 278 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 COX15Q7KZN9 410 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 KLHL36Q8N4N3 616 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 CPA6Q8N4T0 437 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 OR6K6Q8NGW6 343 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 TAAR8Q969N4 342 aa10.39□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF486Q96H40 463 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-209ENST00000512055 FRG2BQ96QU4 278 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms