RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SLC25A19Q9HC21 320 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 KCNMB3Q9NPA1 279 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 THYN1Q9P016 225 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 VPS54Q9P1Q0 977 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 PAK5Q9P286 719 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 EIF3KQ9UBQ5 218 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 FAM153AQ9UHL3 310 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 TSPAN16Q9UKR8 245 aa2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 DIMT1Q9UNQ2 313 aaKnown RBP2.8□□□□□ -1.96
TRAPPC11-207ENST00000511409 DHX29Q7Z478 1369 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 IGHV3OR16-10A0A075B7F0 116 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 MEI4A8MW99 385 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 EPM2AB3EWF7 344 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CHEK1O14757 476 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CSDE1O75534 798 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 REC8O95072 547 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CXCL14O95715 111 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SLC4A1P02730 911 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 OR9G9P0C7N8 305 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CCDC192P0DO97 292 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CALML3P27482 149 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SLC1A4P43007 532 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 MTIF2P46199 727 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CASP9P55211 416 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 YBEYP58557 167 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 GSTO1P78417 241 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CCZ1BP86790 482 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CCZ1P86791 482 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 WASHC5Q12768 1159 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 BTG3Q14201 252 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SLC17A1Q14916 467 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SIX1Q15475 284 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SNAI3Q3KNW1 292 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 NKAIN2Q5VXU1 208 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 RAB12Q6IQ22 244 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CDC42EP5Q6NZY7 148 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 ZNF343Q6P1L6 599 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 GPRIN3Q6ZVF9 776 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 RABEPKQ7Z6M1 372 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CARM1Q86X55 608 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 ABHD12Q8N2K0 398 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 GVQW1Q8N7I0 195 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 ZNF781Q8N8C0 355 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 TMEM185AQ8NFB2 350 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 OR1B1Q8NGR6 318 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 EXOC6Q8TAG9 804 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SSC4DQ8WTU2 575 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 C11orf52Q96A22 123 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 NABP1Q96AH0 204 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SLCO4A1Q96BD0 722 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 RAB39BQ96DA2 213 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 COG3Q96JB2 828 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CDHR1Q96JP9 859 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 ATOH8Q96SQ7 321 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 OCR1Q9BZK8 76 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 EGLN1Q9GZT9 426 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 PNNQ9H307 717 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 NT5DC2Q9H857 520 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 JPT2Q9H910 190 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 SYTL2Q9HCH5 934 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 ANO10Q9NW15 660 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 CTSZQ9UBR2 303 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 ZNF346Q9UL40 294 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 MRPS2Q9Y399 296 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 FBXO7Q9Y3I1 522 aa2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 TDRD15B5MCY1 1934 aaKnown RBP2.79□□□□□ -1.96
TRAPPC11-207ENST00000511409 TRBV5-4A0A0C4DH59 114 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 TEX48A0A1B0GUV7 120 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ZNF724A8MTY0 619 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 KRTAP16-1A8MUX0 517 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 K7ERI5 159 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 PI15O43692 258 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 SERPINF2P08697 491 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 HIST1H2AGP0C0S8 130 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 CDKL1Q00532 357 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ACY1Q03154 408 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 RIGQ13278 110 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 MSLNQ13421 630 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ITPK1Q13572 414 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 EMC2Q15006 297 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 EXOSC7Q15024 291 aaKnown RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 KRTAP27-1Q3LI81 207 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 CCDC40Q4G0X9 1142 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 GLIPR1L2Q4G1C9 344 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 EPC2Q52LR7 807 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 TEX35Q5T0J7 233 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 HIST2H2AA3Q6FI13 130 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 STEAP1BQ6NZ63 245 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 DLEU7Q6UYE1 221 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ASRGL1Q7L266 308 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 MIER3Q7Z3K6 550 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 BNIPLQ7Z465 357 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ADAMTSL2Q86TH1 951 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 GTSCR1Q86UQ5 136 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 ITIH5Q86UX2 942 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 LINC00518Q8N0U6 118 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 Q8N377 158 aa2.78□□□□□ -1.96
TRAPPC11-207ENST00000511409 CHCHD4Q8N4Q1 142 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms