RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 SPINK14Q6IE38 97 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 TMEM156Q8N614 296 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 TMEM178AQ8NBL3 297 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 FAR1Q8WVX9 515 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 TMEM125Q96AQ2 219 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 PPWD1Q96BP3 646 aaKnown RBP15.77■□□□□ 0.12
CLDND1-219ENST00000508659 FBXL20Q96IG2 436 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 TRMOQ9BU70 441 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 CNPPD1Q9BV87 410 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 SHCBP1LQ9BZQ2 653 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 CENPHQ9H3R5 247 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 KLHL1Q9NR64 748 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.77■□□□□ 0.12
CLDND1-219ENST00000508659 MCM8Q9UJA3 840 aa15.77■□□□□ 0.12
CLDND1-219ENST00000508659 RELNP78509 3460 aa15.77■□□□□ 0.11
CLDND1-219ENST00000508659 PRKNO60260 465 aaPredicted RBP15.76■□□□□ 0.11
CLDND1-219ENST00000508659 SLC25A12O75746 678 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 NEURL1O76050 574 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 TRHRP34981 398 aaPredicted RBP15.76■□□□□ 0.11
CLDND1-219ENST00000508659 HLCSP50747 726 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 SSR4P51571 173 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 MRPL49Q13405 166 aaKnown RBP15.76■□□□□ 0.11
CLDND1-219ENST00000508659 SPRED3Q2MJR0 410 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 SPDYAQ5MJ70 313 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 SCIMPQ6UWF3 145 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF321PQ8N8H1 164 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 FAM98AQ8NCA5 519 aaKnown RBP15.76■□□□□ 0.11
CLDND1-219ENST00000508659 OR8K3Q8NH51 312 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 CHTF18Q8WVB6 975 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 RIT1Q92963 219 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 BARD1Q99728 777 aaKnown RBP15.76■□□□□ 0.11
CLDND1-219ENST00000508659 MECRQ9BV79 373 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 GATA5Q9BWX5 397 aaPredicted RBP15.76■□□□□ 0.11
CLDND1-219ENST00000508659 PCDHGB6Q9Y5F9 930 aa15.76■□□□□ 0.11
CLDND1-219ENST00000508659 UBR5O95071 2799 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 TENM4Q6N022 2769 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ANKUB1A6NFN9 424 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 GOLGA6L10A6NI86 522 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 WASHC1A8K0Z3 465 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 PGRMC2O15173 223 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 OR2J2O76002 312 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 CHEK2O96017 543 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 CRYABP02511 175 aaKnown RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 SLC35E2P0CK97 266 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 UROSP10746 265 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ALDH3A1P30838 453 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 TIA1P31483 386 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 DEKP35659 375 aaKnown RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ALDH9A1P49189 494 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 TRA2BP62995 288 aaKnown RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ERVK-8P63133 956 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 RNF4P78317 190 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF468Q5VIY5 522 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 CLEC6AQ6EIG7 209 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 SLC48A1Q6P1K1 146 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 CROCCP2Q86T23 111 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 GALNT12Q8IXK2 581 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 CYP4Z2PQ8N1L4 340 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ST6GALNAC3Q8NDV1 305 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 OR4K14Q8NGD5 310 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 OR5L2Q8NGL0 311 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF721Q8TF20 911 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 SCMH1Q96GD3 660 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 APIPQ96GX9 242 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 SENP5Q96HI0 755 aaPredicted RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ZIM3Q96PE6 472 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 TAAR6Q96RI8 345 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 SLX1AQ9BQ83 275 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 EBPLQ9BY08 206 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 HES7Q9BYE0 225 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 MYOTQ9UBF9 498 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 ERVK-19Q9WJR5 959 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 YARS2Q9Y2Z4 477 aaKnown RBP15.75■□□□□ 0.11
CLDND1-219ENST00000508659 FIS1Q9Y3D6 152 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 PCDHA9Q9Y5H5 950 aa15.75■□□□□ 0.11
CLDND1-219ENST00000508659 SCN2AQ99250 2005 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 SERTM1A2A2V5 107 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 A8MVJ9 347 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 WWP2O00308 870 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 TYROBPO43914 113 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 RSL1D1O76021 490 aaKnown RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 ZIC2O95409 532 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 IGKV3-11P04433 115 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 MYZAPP0CAP1 466 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 EDN3P14138 238 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 CREB1P16220 341 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 GALNSP34059 522 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 HK2P52789 917 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 PMP22Q01453 160 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 BTKQ06187 659 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 ZNF267Q14586 743 aaPredicted RBP15.74■□□□□ 0.11
CLDND1-219ENST00000508659 RNF111Q6ZNA4 994 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 DGAT2L6Q6ZPD8 337 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 GPALPP1Q8IXQ4 340 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 MMP21Q8N119 569 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 ASB15Q8WXK1 588 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 NR4A3Q92570 626 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 UCN3Q969E3 161 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 KLHL29Q96CT2 875 aa15.74■□□□□ 0.11
CLDND1-219ENST00000508659 GAL3ST4Q96RP7 486 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms