RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DNAJB14Q8TBM8 379 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 ANKRD9Q96BM1 317 aaPredicted RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 TM4SF18Q96CE8 201 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 KLHL29Q96CT2 875 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 TUBGCP3Q96CW5 907 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 C11orf24Q96F05 449 aaPredicted RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 ZNF354BQ96LW1 612 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 LMF1Q96S06 567 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 TNFRSF12AQ9NP84 129 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 MYNNQ9NPC7 610 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 TEX10Q9NXF1 929 aaPredicted RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 PPIEQ9UNP9 301 aaKnown RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 EIF3LQ9Y262 564 aaKnown RBP8.55□□□□□ -1.04
NUP54-207ENST00000508583 DLGAP4Q9Y2H0 992 aa8.55□□□□□ -1.04
NUP54-207ENST00000508583 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 IGHV3-20A0A0C4DH32 117 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 OR2W5A6NFC9 320 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 GLOD5A6NK44 160 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 TMEM233B4DJY2 109 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 FCHO1O14526 889 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 HDAC3O15379 428 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 ITM2AO43736 263 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 FGF17O60258 216 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 SNNO75324 88 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 LYPLA1O75608 230 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 ZFAND5O76080 213 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 PRPS2P11908 318 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 CHN1P15882 459 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 PORP16435 677 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 DDCP20711 480 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 NTSP30990 170 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 MPIP34949 423 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 HPCAL1P37235 193 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 CASRP41180 1078 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 XKP51811 444 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 HNRNPFP52597 415 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 RAE1P78406 368 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 MFAP5Q13361 173 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 MEP1AQ16819 746 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 GALNTL6Q49A17 601 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 PCSK4Q6UW60 755 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 IGFL3Q6UXB1 125 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 HSDL2Q6YN16 418 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 Q6ZSR9 355 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 R3HCC1LQ7Z5L2 792 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 SHISA5Q8N114 240 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 LRRC25Q8N386 305 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 HORMAD2Q8N7B1 307 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 TEX19Q8NA77 164 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 FNDC5Q8NAU1 212 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 TMEM52Q8NDY8 209 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 CDC26Q8NHZ8 85 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 PIWIL2Q8TC59 973 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 BRIX1Q8TDN6 353 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 C16orf78Q8WTQ4 265 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 ZNF75CPQ92670 426 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 RIT1Q92963 219 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 ERP27Q96DN0 273 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 ZNF764Q96H86 408 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 FBXL20Q96IG2 436 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 C7orf26Q96N11 449 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 SORT1Q99523 831 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 PRPF18Q99633 342 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 WDR77Q9BQA1 342 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 EBPLQ9BY08 206 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 DEFB126Q9BYW3 111 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 RNF32Q9H0A6 362 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 TUBB1Q9H4B7 451 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 ZNF552Q9H707 407 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 NOP53Q9NZM5 478 aaKnown RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 ANAPC2Q9UJX6 822 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 UTS2RQ9UKP6 389 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 CFL2Q9Y281 166 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 TP53TG5Q9Y2B4 290 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 CCL27Q9Y4X3 112 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 POLR3HQ9Y535 204 aaPredicted RBP8.54□□□□□ -1.04
NUP54-207ENST00000508583 COL6A6A6NMZ7 2263 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 DOCK10Q96BY6 2186 aa8.54□□□□□ -1.04
NUP54-207ENST00000508583 OR6C76A6NM76 312 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 DYNC1I1O14576 645 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 PEX11AO75192 247 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ERAL1O75616 437 aaKnown RBP8.53□□□□□ -1.04
NUP54-207ENST00000508583 BCAS2O75934 225 aaPredicted RBP8.53□□□□□ -1.04
NUP54-207ENST00000508583 ATP1B1P05026 303 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 IL3P08700 152 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ITGAMP11215 1152 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 CPMP14384 443 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ARRB2P32121 409 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 EFNA3P52797 238 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ERVK-8P63133 956 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ARG2P78540 354 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 OCRLQ01968 901 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ID2Q02363 134 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 C2orf80Q0P641 193 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms