RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CCNB1P14635 433 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ITGAXP20702 1163 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACKR3P25106 362 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ELAVL4P26378 380 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 HOXA9P31269 272 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 FEN1P39748 380 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MAGEB1P43366 347 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 RFX3P48380 749 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 KCNJ3P48549 501 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 THBS3P49746 956 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACADVLP49748 655 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC7A2P52569 658 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 FOXL2P58012 376 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 NANOS2P60321 138 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 OSTNP61366 133 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SNRPEP62304 92 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPC5P78333 572 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CDK3Q00526 305 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 REEP5Q00765 189 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 GLO1Q04760 184 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MBTD1Q05BQ5 628 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SCRN3Q0VDG4 424 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SREBF2Q12772 1141 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 GANABQ14697 944 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 HEPACAMQ14CZ8 416 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMED2Q15363 201 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 PTCHD3Q3KNS1 767 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 DCAF4L1Q3SXM0 396 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 UGT3A2Q3SY77 523 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AWAT1Q58HT5 328 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 TMEM63BQ5T3F8 832 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPR157Q5UAW9 335 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AGAP6Q5VW22 663 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 HIST2H2AA3Q6FI13 130 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 KIAA1324Q6UXG2 1013 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MOB3CQ70IA8 216 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 NDUFAF7Q7L592 441 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ADGRD2Q7Z7M1 963 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 TSPAN33Q86UF1 283 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CCDC190Q86UF4 302 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CYP4Z1Q86W10 505 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 KMT5CQ86Y97 462 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 GPR65Q8IYL9 337 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 IZUMO1Q8IYV9 350 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AMER3Q8N944 861 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SCAIQ8N9R8 606 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SIDT2Q8NBJ9 832 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 NECAP1Q8NC96 275 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 C7orf57Q8NEG2 295 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 C17orf47Q8NEP4 570 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR4K14Q8NGD5 310 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR10Q1Q8NGQ4 319 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 OR4A16Q8NH70 328 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 FAM110DQ8TAY7 271 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 WIPF2Q8TF74 440 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ING5Q8WYH8 240 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ELMO1Q92556 727 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 P3H4Q92791 437 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 GGHQ92820 318 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLCO2A1Q92959 643 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 RFT1Q96AA3 541 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SPDL1Q96EA4 605 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CERS2Q96G23 380 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MED30Q96HR3 178 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 HPDLQ96IR7 371 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 RBM41Q96IZ5 413 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF578Q96N58 590 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZNF583Q96ND8 569 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 DUX5Q96PT3 197 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLITRK1Q96PX8 696 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SIGLEC11Q96RL6 698 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 DDOQ99489 341 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CMKLR1Q99788 373 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 CPNE1Q99829 537 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 APOL2Q9BQE5 337 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 PCGF1Q9BSM1 259 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 WRAP53Q9BUR4 548 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ANKRD60Q9BZ19 345 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 C6orf62Q9GZU0 229 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ILKAPQ9H0C8 392 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SIRPDQ9H106 197 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 PLEKHA4Q9H4M7 779 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ACTL8Q9H568 366 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MVB12BQ9H7P6 319 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MTHFD2LQ9H903 347 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 UBTD1Q9HAC8 227 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ZFP14Q9HCL3 533 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SLC22A11Q9NSA0 550 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 OSER1Q9NX31 292 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MIS18AQ9NYP9 233 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 MTCH1Q9NZJ7 389 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 STOX2Q9P2F5 926 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 NARFQ9UHQ1 456 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 ERRFI1Q9UJM3 462 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 IKZF2Q9UKS7 526 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 AMFRQ9UKV5 643 aa3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 SAMHD1Q9Y3Z3 626 aaKnown RBP3.37□□□□□ -1.87
HMGB3P15-201ENST00000507326 PPIAL4EA0A075B759 164 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms