RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 C8orf89P0DMQ9 161 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 BMP2P12643 396 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 HTR1EP28566 365 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 CCKBRP32239 447 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 BUD31P41223 144 aaPredicted RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 CLDN6P56747 220 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 EEF1A2Q05639 463 aaKnown RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 RIPK1Q13546 671 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 TRA2AQ13595 282 aaKnown RBP eCLIP9.77□□□□□ -0.85
TPM3-217ENST00000504663 TRIM25Q14258 630 aaKnown RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 LTB4RQ15722 352 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 MAPK11Q15759 364 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 COX20Q5RI15 118 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 FHL5Q5TD97 284 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 TLDC1Q6P9B6 456 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 ZZZ3Q8IYH5 903 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 NATD1Q8N6N6 113 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 TTC29Q8NA56 475 aaPredicted RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 OR10A6Q8NH74 314 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 OR5AK3PQ8NH89 298 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 FAM110BQ8TC76 370 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 MVB12AQ96EY5 273 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 GIMAP5Q96F15 307 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 GBP5Q96PP8 586 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 RBCK1Q9BYM8 510 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 RPF2Q9H7B2 306 aaKnown RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 SYNDIG1Q9H7V2 258 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 CLK4Q9HAZ1 481 aaKnown RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 MS4A12Q9NXJ0 267 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 NTMQ9P121 344 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 ZNF282Q9UDV7 671 aaPredicted RBP9.77□□□□□ -0.85
TPM3-217ENST00000504663 PCDHB3Q9Y5E6 796 aa9.77□□□□□ -0.85
TPM3-217ENST00000504663 TCRBV3S1A0A5B6 114 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 PMS2P1A4D2B8 440 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 TMEM229AB2RXF0 380 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 PROB1E7EW31 1015 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 CLIC1O00299 241 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ARPC2O15144 300 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 GUCY1B2O75343 617 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 JRKO75564 520 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 GCM2O75603 506 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 KRT36O76013 467 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 KCNK5O95279 499 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 PSMG1O95456 288 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ATP6V1G2O95670 118 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 C8BP07358 591 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 FGF5P12034 268 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 CPMP14384 443 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 GGT1P19440 569 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 TCN1P20061 433 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 ZNF10P21506 573 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 RORAP35398 523 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 FEN1P39748 380 aaKnown RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 OR1D4P47884 311 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 PPM1FP49593 454 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 CRYBA2P53672 197 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ID2Q02363 134 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ACY1Q03154 408 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 FOLH1Q04609 750 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ABHD18Q0P651 414 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 TRAP1Q12931 704 aaKnown RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 BNIP2Q12982 314 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 HSPB3Q12988 150 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 DUSP8Q13202 625 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 SPIDRQ14159 915 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 NDUFA9Q16795 377 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ZNF628Q5EBL2 1059 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 TMTC4Q5T4D3 741 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 C1orf146Q5VVC0 180 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 RHBDD2Q6NTF9 364 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 PWWP2BQ6NUJ5 590 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 TMEM64Q6YI46 380 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ZNF621Q6ZSS3 439 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 TTLL10Q6ZVT0 673 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 SERPINA11Q86U17 422 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ZC3H7AQ8IWR0 971 aaKnown RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 OR4N5Q8IXE1 308 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 SIMC1Q8NDZ2 872 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 OR52N2Q8NGI0 321 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 OR9A2Q8NGT5 310 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 PNPT1Q8TCS8 783 aaKnown RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 TBC1D20Q96BZ9 403 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 NEURL3Q96EH8 262 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 FAM120BQ96EK7 910 aaKnown RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 RNF31Q96EP0 1072 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 ZBED6CLQ96FA7 236 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 OR6C1Q96RD1 312 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 DPH2Q9BQC3 489 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 SLC35A5Q9BS91 424 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 NEUROD4Q9HD90 331 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 NKX1-2Q9UD57 310 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 VPS4AQ9UN37 437 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 WDFY3Q8IZQ1 3526 aa9.76□□□□□ -0.85
TPM3-217ENST00000504663 EP300Q09472 2414 aaPredicted RBP9.76□□□□□ -0.85
TPM3-217ENST00000504663 IGLV3-12A0A075B6K2 115 aa9.75□□□□□ -0.85
TPM3-217ENST00000504663 IGKV3D-11A0A0A0MRZ8 115 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 333.2 ms