RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CCBE1Q6UXH8 406 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 CASC2Q6XLA1 102 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CBLL1Q75N03 491 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CHST9Q7L1S5 443 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARMCX6Q7L4S7 300 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 WDR53Q7Z5U6 358 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MYPOPQ86VE0 399 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 IFNEQ86WN2 208 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CATSPERDQ86XM0 798 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARID3BQ8IVW6 561 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZNF295-AS1Q8N0V1 137 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 LGI2Q8N0V4 545 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 MMP21Q8N119 569 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM43AQ8N2R8 423 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM83FQ8NEG4 500 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 PHF10Q8WUB8 498 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 SRSF12Q8WXF0 261 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 APBB2Q92870 758 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 TCF12Q99081 682 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DOHHQ9BU89 302 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 DUSP23Q9BVJ7 150 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZYG11BQ9C0D3 744 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 GOLPH3LQ9H4A5 285 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CCNB1IP1Q9NPC3 277 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 OR2S2Q9NQN1 319 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PIGVQ9NUD9 493 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PLCXD1Q9NUJ7 323 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 PARPBPQ9NWS1 579 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 BFARQ9NZS9 450 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 CLEC4EQ9ULY5 219 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 FZR1Q9UM11 496 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ZFR2Q9UPR6 939 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 MRPS2Q9Y399 296 aaKnown RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 FAM96BQ9Y3D0 163 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 ETV7Q9Y603 341 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 AKAP13Q12802 2813 aa1.35□□□□□ -2.19
XRN1-214ENST00000498077 RPAP1Q9BWH6 1393 aaPredicted RBP1.35□□□□□ -2.19
XRN1-214ENST00000498077 ARFGEF3Q5TH69 2177 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 IGLV3-16A0A075B6K0 115 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CYP3A7-CYP3A51PA0A087WV96 503 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NEMP2A6NFY4 417 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD61A6NGH8 418 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ASB14A6NK59 587 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NCBP2LA6PVI3 153 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 SYS1-DBNDD2H3BUS1 97 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 DNPH1O43598 174 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 AP2A1O95782 977 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CLEC3BP05452 202 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 COL6A1P12109 1028 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MTHFD2P13995 350 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SAT1P21673 171 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 UGT1A4P22310 534 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RPS12P25398 132 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 TMOD1P28289 359 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GDI1P31150 447 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 S100A5P33763 92 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 UGT1A3P35503 534 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 THBS3P49746 956 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CCT8P50990 548 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 HAND2P61296 217 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ARHGAP19Q14CB8 494 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SIX1Q15475 284 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 NTRK3Q16288 839 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KCTD21Q4G0X4 260 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GPAT3Q53EU6 434 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 DUS1LQ6P1R4 473 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 CFAP161Q6P656 301 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ZNF730Q6ZMV8 503 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TPRG1Q6ZUI0 275 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FCRLAQ7L513 359 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 HS2ST1Q7LGA3 356 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ANKS1BQ7Z6G8 1248 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FGD2Q7Z6J4 655 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TSPYL5Q86VY4 417 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 TMEM200AQ86VY9 491 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PTOV1Q86YD1 416 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CRLF3Q8IUI8 442 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MICU2Q8IYU8 434 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD13AQ8IZ07 590 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MARVELD2Q8N4S9 558 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RNF182Q8N6D2 247 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 IGSF22Q8N9C0 903 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 WDR31Q8NA23 367 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 C1orf131Q8NDD1 294 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 RAB2BQ8WUD1 216 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 THRSPQ92748 146 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 YIPF6Q96EC8 236 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 Q96MF0 132 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SPATA13Q96N96 652 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 BBC3Q96PG8 261 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 OR7D2Q96RA2 312 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CITED1Q99966 193 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 COPS4Q9BT78 406 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CLEC7AQ9BXN2 247 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TEX12Q9BXU0 123 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RNF26Q9BY78 433 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 POLR3FQ9H1D9 316 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 VCPKMTQ9H867 229 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CHODLQ9H9P2 273 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SPAG4Q9NPE6 437 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms