RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 UHMK1Q8TAS1 419 aaKnown RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 NUBPLQ8TB37 319 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 DOK4Q8TEW6 326 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 TANKQ92844 425 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 UCN3Q969E3 161 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 SENP5Q96HI0 755 aaPredicted RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 TTTY12Q9BZ98 90 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 DDX31Q9H8H2 851 aaKnown RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 ZDHHC11Q9H8X9 412 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 LYARQ9NX58 379 aaKnown RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 COPS7AQ9UBW8 275 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 PPT2Q9UMR5 302 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 HRH3Q9Y5N1 445 aa13.21□□□□□ -0.29
VTI1A-209ENST00000496445 PHF3Q92576 2039 aaKnown RBP13.21□□□□□ -0.29
VTI1A-209ENST00000496445 A0A1W2PS29 197 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 GLOD5A6NK44 160 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 E9PLN8 166 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 FOXE1O00358 373 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-209ENST00000496445 PRRG2O14669 202 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 CLDN9O95484 217 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 CLDN14O95500 239 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 TPOP07202 933 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 RPS17P08708 135 aaKnown RBP13.2□□□□□ -0.3
VTI1A-209ENST00000496445 RBP1P09455 135 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 SBK3P0C264 359 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 FAM58BPP0C7Q3 252 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 CCL3P10147 92 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 NR2F6P10588 404 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 ALOX15P16050 662 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-209ENST00000496445 PTGS2P35354 604 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 BUD31P41223 144 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-209ENST00000496445 SERPINB9P50453 376 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 CCNG1P51959 295 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 ASPHQ12797 758 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 PIGGQ5H8A4 983 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 LYPD8Q6UX82 237 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 RTL4Q6ZR62 310 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 RPS27LQ71UM5 84 aaKnown RBP13.2□□□□□ -0.3
VTI1A-209ENST00000496445 NUDT13Q86X67 352 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
VTI1A-209ENST00000496445 GOLM1Q8NBJ4 401 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 OR5L2Q8NGL0 311 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 VKORC1Q9BQB6 163 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 NTMT1Q9BV86 223 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 TSPYL1Q9H0U9 437 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 SH2D2AQ9NP31 389 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 LIPGQ9Y5X9 500 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 CELSR1Q9NYQ6 3014 aa13.2□□□□□ -0.3
VTI1A-209ENST00000496445 POLQO75417 2590 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 POC1B-GALNT4F8VUJ3 575 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 PDE9AO76083 593 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 SEMA3DO95025 777 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 GPR75O95800 540 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 GBAP04062 536 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 GCAP28676 217 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TNFRSF8P28908 595 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TLX1P31314 330 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 DNASE1L1P49184 302 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 PPIAP62937 165 aaKnown RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 HERVK_113P63132 956 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 ERVK-8P63133 956 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TSNAXIP1Q2TAA8 658 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 GGTA1PQ4G0N0 100 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 GLE1Q53GS7 698 aaKnown RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 EMC4Q5J8M3 183 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 CYP20A1Q6UW02 462 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TAOK1Q7L7X3 1001 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 RPRMLQ8N4K4 120 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TMEM151AQ8N4L1 468 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 MNS1Q8NEH6 495 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 MTFMTQ96DP5 389 aaKnown RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 ERVK-6Q9BXR3 956 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 DEFB127Q9H1M4 99 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 CHST11Q9NPF2 352 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TEX10Q9NXF1 929 aaPredicted RBP13.19□□□□□ -0.3
VTI1A-209ENST00000496445 TMCO1Q9UM00 188 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 ERVK-19Q9WJR5 959 aa13.19□□□□□ -0.3
VTI1A-209ENST00000496445 HCFC1P51610 2035 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 A8MT66 165 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 ACOT7O00154 380 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 PPP6CO00743 305 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SMIM24O75264 130 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 KRT38O76015 456 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 SNRPB2P08579 225 aaKnown RBP13.18□□□□□ -0.3
VTI1A-209ENST00000496445 COL6A2P12110 1019 aa13.18□□□□□ -0.3
VTI1A-209ENST00000496445 CNTFP26441 200 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms