RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 NKIRAS1Q9NYS0 192 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 GIMAP2Q9UG22 337 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 TEKT2Q9UIF3 430 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 ZDHHC2Q9UIJ5 367 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 MCM8Q9UJA3 840 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 DLGAP4Q9Y2H0 992 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 POLR3HQ9Y535 204 aaPredicted RBP9.17□□□□□ -0.94
CALD1-223ENST00000496024 PCDHA9Q9Y5H5 950 aa9.17□□□□□ -0.94
CALD1-223ENST00000496024 SERTM1A2A2V5 107 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 HRKO00198 91 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 SLC28A1O00337 649 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 PIP5K1BO14986 540 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 RGS14O43566 566 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 SKAP2O75563 359 aaPredicted RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 DDAH2O95865 285 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 WDPCPO95876 746 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 IL3P08700 152 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 DHRS4L1P0CG22 281 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 PTGER1P34995 402 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 SERPINB5P36952 375 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 FEN1P39748 380 aaKnown RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 CASRP41180 1078 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 STT3AP46977 705 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 CLCN2P51788 898 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 XKP51811 444 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 WDR4P57081 412 aaKnown RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 ABCE1P61221 599 aaKnown RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 C2orf80Q0P641 193 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 STX3Q13277 289 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 ZNF267Q14586 743 aaPredicted RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 GALNTL6Q49A17 601 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 AGBL2Q5U5Z8 902 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 FAM180BQ6P0A1 224 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 IGFL2Q6UWQ7 119 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 IGFL3Q6UXB1 125 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 C16orf47Q6ZP98 133 aaPredicted RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 TRIM46Q7Z4K8 759 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 RPS19BP1Q86WX3 136 aaKnown RBP9.16□□□□□ -0.94
CALD1-223ENST00000496024 HPS6Q86YV9 775 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 SLC5A8Q8N695 610 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 Q8NA96 180 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 OR1N1Q8NGS0 311 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 OR6Y1Q8NGX8 325 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 OR2T11Q8NH01 316 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 OR14A16Q8NHC5 309 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 SLC2A12Q8TD20 617 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 VMP1Q96GC9 406 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 ZNF354BQ96LW1 612 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 NPAS2Q99743 824 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 CNPPD1Q9BV87 410 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 FAIM2Q9BWQ8 316 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 EPN3Q9H201 632 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 LRTM1Q9HBL6 345 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 PFDN4Q9NQP4 134 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 ANKRD10Q9NXR5 420 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 HEY2Q9UBP5 337 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 B3GNT3Q9Y2A9 372 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 DNAJC15Q9Y5T4 150 aa9.16□□□□□ -0.94
CALD1-223ENST00000496024 HELZ2Q9BYK8 2649 aaKnown RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 ATP6AP2A0A1C7CYW4 349 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 C1orf226A1L170 272 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 GABRR3A8MPY1 467 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 DYRK3O43781 588 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 PRKNO60260 465 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 ATP6AP2O75787 350 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 RSL1D1O76021 490 aaKnown RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 FGF4P08620 206 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 PORP16435 677 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 NT5EP21589 574 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 SLC1A6P48664 564 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 ERVK-8P63133 956 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 IGLV3-21P80748 117 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 OC90Q02509 493 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 TLE1Q04724 770 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 TERF2Q15554 542 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 MEP1AQ16819 746 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 UGT3A2Q3SY77 523 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 NOXRED1Q6NXP6 359 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 H3F3CQ6NXT2 135 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 SLC48A1Q6P1K1 146 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 Q6ZS92 163 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 Q6ZSR9 355 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 ST13P4Q8IZP2 240 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 CISD2Q8N5K1 135 aaKnown RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 APCDD1LQ8NCL9 501 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 MORN4Q8NDC4 146 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 HAS2Q92819 552 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 RIT1Q92963 219 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 PNPLA2Q96AD5 504 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 EXOSC8Q96B26 276 aaKnown RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 KLHL29Q96CT2 875 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 SENP5Q96HI0 755 aaPredicted RBP9.15□□□□□ -0.94
CALD1-223ENST00000496024 PPP1R36Q96LQ0 422 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 C1orf109Q9NX04 203 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 ABI3Q9P2A4 366 aa9.15□□□□□ -0.94
CALD1-223ENST00000496024 COPS7AQ9UBW8 275 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms