RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 COX7A2P14406 83 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 ALOX15P16050 662 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-219ENST00000491183 BUD31P41223 144 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-219ENST00000491183 CCNG1P51959 295 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 ZNF630Q2M218 657 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-219ENST00000491183 MPEG1Q2M385 716 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 PIGGQ5H8A4 983 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 CYP20A1Q6UW02 462 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 TICAM1Q8IUC6 712 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 LURAP1LQ8IV03 231 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 C9orf40Q8IXQ3 194 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 MARVELD3Q96A59 401 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 DMRTA2Q96SC8 542 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 MRPL57Q9BQC6 102 aaKnown RBP16.66■□□□□ 0.26
HMGN1-219ENST00000491183 DEFB127Q9H1M4 99 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 SEMA4BQ9NPR2 832 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-219ENST00000491183 G3V3Y1 287 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 PRRG2O14669 202 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 CDC40O60508 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 PDE9AO76083 593 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 SEMA3DO95025 777 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 NADKO95544 446 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 AIFM1O95831 613 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 RPS17P08708 135 aaKnown RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 SNRPAP09012 282 aaKnown RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 AGAP20933 346 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 CNR1P21554 472 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 HTR1EP28566 365 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 PTGS2P35354 604 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 ARL1P40616 181 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 PPIAP62937 165 aaKnown RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 PLIN5Q00G26 463 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 ASPHQ12797 758 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 FRG2Q64ET8 278 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 OPN5Q6U736 354 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 LYPD8Q6UX82 237 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 RTL4Q6ZR62 310 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 NUDT13Q86X67 352 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 ST13P4Q8IZP2 240 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 OR4F6Q8NGB9 312 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 NUBPLQ8TB37 319 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 FAM57AQ8TBR7 257 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 FBXL20Q96IG2 436 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 FRG2BQ96QU4 278 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 SERPINI1Q99574 410 aa16.65■□□□□ 0.26
HMGN1-219ENST00000491183 MRPL46Q9H2W6 279 aaKnown RBP16.65■□□□□ 0.26
HMGN1-219ENST00000491183 A0A1W2PS29 197 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 E9PLN8 166 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 KIF2AO00139 706 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-219ENST00000491183 PGRMC2O15173 223 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 NR2F6P10588 404 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 TSPAN8P19075 237 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 SMSP52788 366 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 CDH13P55290 713 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 HERVK_113P63132 956 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 ERVK-8P63133 956 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 SPRED3Q2MJR0 410 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 ZNF791Q3KP31 576 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-219ENST00000491183 FAM219BQ5XKK7 198 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 TIFABQ6ZNK6 161 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 MILR1Q7Z6M3 343 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 GOLM1Q8NBJ4 401 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 KIF18AQ8NI77 898 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 ZNF483Q8TF39 744 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-219ENST00000491183 SGCZQ96LD1 299 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 VKORC1Q9BQB6 163 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 ERVK-6Q9BXR3 956 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 FARSBQ9NSD9 589 aaKnown RBP16.64■□□□□ 0.25
HMGN1-219ENST00000491183 TEX10Q9NXF1 929 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-219ENST00000491183 TMEM216Q9P0N5 145 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 ERVK-19Q9WJR5 959 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 ZNF407Q9C0G0 2248 aa16.64■□□□□ 0.25
HMGN1-219ENST00000491183 EXOC1LA0A1B0GW35 172 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 A8MT66 165 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 FAM166BA8MTA8 275 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 DYRK3O43781 588 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 GLSO94925 669 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-219ENST00000491183 CLPSP04118 112 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 KLK1P06870 262 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 ABHD2P08910 425 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 CCL3P10147 92 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 GALNSP34059 522 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 SLC37A1P57057 533 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 PLGLB1Q02325 96 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 FOXO1Q12778 655 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 ZNF267Q14586 743 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-219ENST00000491183 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 SGO1Q5FBB7 561 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 TTC19Q6DKK2 380 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-219ENST00000491183 LETMD1Q6P1Q0 360 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 ADGRD1Q6QNK2 874 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 CEP112Q8N8E3 955 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 PHF10Q8WUB8 498 aaKnown RBP16.63■□□□□ 0.25
HMGN1-219ENST00000491183 RIT1Q92963 219 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 ART5Q96L15 291 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 FAM173AQ9BQD7 235 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 PELOQ9BRX2 385 aaKnown RBP16.63■□□□□ 0.25
HMGN1-219ENST00000491183 CNPPD1Q9BV87 410 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 C1QTNF3Q9BXJ4 246 aa16.63■□□□□ 0.25
HMGN1-219ENST00000491183 MRPL1Q9BYD6 325 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms