RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 KCNC4Q03721 635 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 NIPAL1Q6NVV3 410 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 OR2A1Q8NGT9 310 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 OR10G6Q8NH81 332 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 ZFPM2Q8WW38 1151 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 NEIL2Q969S2 332 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 EGLN2Q96KS0 407 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 BARD1Q99728 777 aaKnown RBP21.59■■□□□ 1.05
USF3-203ENST00000491165 EDEM2Q9BV94 578 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 OR6C2Q9NZP2 312 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 OR6C74A6NCV1 312 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 MYO1GB0I1T2 1018 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 E7EQ34 232 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 CHRM5P08912 532 aaPredicted RBP21.59■■□□□ 1.05
USF3-203ENST00000491165 CYP4B1P13584 511 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 POLR2CP19387 275 aaPredicted RBP21.59■■□□□ 1.05
USF3-203ENST00000491165 FMO3P31513 532 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 BCAP31P51572 246 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 LAPTM4AQ15012 233 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 KDM4DQ6B0I6 523 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 NOXRED1Q6NXP6 359 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 OR7A2PQ8NGA2 310 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 FLVCR1-AS1Q8TAF5 88 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 HMG20AQ9NP66 347 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 DNAJC11Q9NVH1 559 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 ERVK-18Q9QC07 812 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 RPS6KA6Q9UK32 745 aa21.59■■□□□ 1.05
USF3-203ENST00000491165 SLC22A1O15245 554 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 NUDT21O43809 227 aaKnown RBP21.58■■□□□ 1.05
USF3-203ENST00000491165 FABP3P05413 133 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 ZNF883P0CG24 379 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 PRPS1L1P21108 318 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 DNAJA1P31689 397 aaKnown RBP21.58■■□□□ 1.05
USF3-203ENST00000491165 IDUAP35475 653 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 CLK3P49761 638 aaKnown RBP21.58■■□□□ 1.05
USF3-203ENST00000491165 CXCR4P61073 352 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 RELAQ04206 551 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 CSRP2Q16527 193 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 VMACQ2NL98 169 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 GUSBP11Q6P575 273 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 PIWIL3Q7Z3Z3 882 aaKnown RBP21.58■■□□□ 1.05
USF3-203ENST00000491165 SMPDL3AQ92484 453 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 RAB11FIP5Q9BXF6 653 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 WDR12Q9GZL7 423 aaKnown RBP21.58■■□□□ 1.05
USF3-203ENST00000491165 DUSP21Q9H596 190 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 SCN3BQ9NY72 215 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 RAPGEFL1Q9UHV5 662 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 GMPPBQ9Y5P6 360 aa21.58■■□□□ 1.05
USF3-203ENST00000491165 CLIC1O00299 241 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 ALPPL2P10696 532 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 GLB1P16278 677 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 FPR1P21462 350 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 SLC35A2P78381 396 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 NPTX1Q15818 432 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 PRAMEF13Q5VWM6 474 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 FRG2Q64ET8 278 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 ERICH5Q6P6B1 374 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 PRR23CQ6ZRP0 262 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 SLCO6A1Q86UG4 719 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 FAM181AQ8N9Y4 354 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 FRG2BQ96QU4 278 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 PANX1Q96RD7 426 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 SLC38A3Q99624 504 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 APOL4Q9BPW4 351 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 REXO4Q9GZR2 422 aaKnown RBP21.58■■□□□ 1.04
USF3-203ENST00000491165 IRF2BPLQ9H1B7 796 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 CUEDC1Q9NWM3 386 aaPredicted RBP21.58■■□□□ 1.04
USF3-203ENST00000491165 PCDHGA10Q9Y5H3 936 aa21.58■■□□□ 1.04
USF3-203ENST00000491165 IGKV1-8A0A0C4DH67 115 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 SERTM1A2A2V5 107 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 MAN1A2O60476 641 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 CD22P20273 847 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 ALDH4A1P30038 563 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 HSD17B2P37059 387 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 CATSPEREQ5SY80 951 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 NKAIN2Q5VXU1 208 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 LINC00299Q6ZSB3 139 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 ZZZ3Q8IYH5 903 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 NECTIN3Q9NQS3 549 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 SELENONQ9NZV5 590 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 DCHS1Q96JQ0 3298 aa21.57■■□□□ 1.04
USF3-203ENST00000491165 hCG_2039718K7EN88 272 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 UBXN7O94888 489 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 SEMG1P04279 462 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 OR1D5P58170 312 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 SRSF11Q05519 484 aaKnown RBP21.56■■□□□ 1.04
USF3-203ENST00000491165 PROX2Q3B8N5 592 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 PERM1Q5SV97 790 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 RAB42Q8N4Z0 105 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 SH3KBP1Q96B97 665 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 MAGEB10Q96LZ2 347 aaPredicted RBP21.56■■□□□ 1.04
USF3-203ENST00000491165 EBPLQ9BY08 206 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 SPNS1Q9H2V7 528 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 HRASLS2Q9NWW9 162 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 RHPN2P1A8MT19 583 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 KPNA4O00629 521 aaPredicted RBP21.56■■□□□ 1.04
USF3-203ENST00000491165 KCNK5O95279 499 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 CD59P13987 128 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 ACVR2AP27037 513 aa21.56■■□□□ 1.04
USF3-203ENST00000491165 MAP2K4P45985 399 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms