RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 P4HA1P13674 534 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 PSMC3P17980 439 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 DGKAP23743 735 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 RPL21P46778 160 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 NPBWR1P48145 328 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ALDH3A2P51648 485 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 B3GALT5-AS1P59052 145 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 PITX1P78337 314 aaPredicted RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 MRPS6P82932 125 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ZXDBP98169 803 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 GABPAQ06546 454 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 LGALS3BPQ08380 585 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 KBTBD12Q3ZCT8 623 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 SLC39A12Q504Y0 691 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 FAM46CQ5VWP2 391 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 BTNL8Q6UX41 500 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 VITQ6UXI7 678 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 SLC24A5Q71RS6 500 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 RALGPS2Q86X27 583 aaPredicted RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 METTL27Q8N6F8 245 aaPredicted RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 NOA1Q8NC60 698 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 KIAA0895Q8NCT3 520 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 DMBX1Q8NFW5 382 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 KBTBD8Q8NFY9 601 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 OR10Q1Q8NGQ4 319 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 LMO3Q8TAP4 145 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 HSD17B8Q92506 261 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 PGM2Q96G03 612 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 AK8Q96MA6 479 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 RHNO1Q9BSD3 238 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ZMYND12Q9H0C1 365 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 SRD5A3Q9H8P0 318 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ZFP14Q9HCL3 533 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ECHDC1Q9NTX5 307 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 PKD2L2Q9NZM6 624 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 STUB1Q9UNE7 303 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 ITM2BQ9Y287 266 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 HBS1LQ9Y450 684 aaKnown RBP4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 IGSF9BQ9UPX0 1349 aa4.4□□□□□ -1.71
SSX2IP-208ENST00000490476 A0A0A6YYC8 382 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 A0A1W2PS18 150 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 RNF212BA8MTL3 300 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 PRSS46E5RG02 174 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 I3L1I5 382 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 TTI1O43156 1089 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 PIGNO95427 931 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 SLC16A8O95907 504 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ATP1A1P05023 1023 aaKnown RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ZNF883P0CG24 379 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 THEGLP0DJG4 465 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 UROSP10746 265 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 HLA-DPA1P20036 260 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 NR1D1P20393 614 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 CA4P22748 312 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 SSTR1P30872 391 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 SERPINB6P35237 376 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 VAMP7P51809 220 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ERVPABLB-1P60509 514 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 KLC1Q07866 573 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 GAGE5Q13069 117 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 GAGE6Q13070 117 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 RPA4Q13156 261 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 DMC1Q14565 340 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 FAM166AQ6J272 317 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ALKBH5Q6P6C2 394 aaKnown RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 PRSS55Q6UWB4 352 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 NDUFAF2Q8N183 169 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 TSTD1Q8NFU3 115 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ST7LQ8TDW4 575 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ST6GAL2Q96JF0 529 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ZNF354BQ96LW1 612 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ZNF350Q9GZX5 532 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 LAT2Q9GZY6 243 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ADNPQ9H2P0 1102 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 TFB2MQ9H5Q4 396 aaKnown RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 BICC1Q9H694 974 aaKnown RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 DDX31Q9H8H2 851 aaKnown RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 ZBTB20Q9HC78 741 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 MID1IP1Q9NPA3 183 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 PHPT1Q9NRX4 125 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 RGS18Q9NS28 235 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 FAM207AQ9NSI2 230 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 AKAP7Q9P0M2 348 aaPredicted RBP4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 TAAR2Q9P1P5 351 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 TRPC4Q9UBN4 977 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 STX8Q9UNK0 236 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 PCDHGA1Q9Y5H4 931 aa4.39□□□□□ -1.71
SSX2IP-208ENST00000490476 MYO18AQ92614 2054 aaKnown RBP4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 LOC101059948A0A1B0GTJ6 334 aa4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 HEATR9A2RTY3 570 aa4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 SDR42E2A6NKP2 422 aa4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 CCL24O00175 119 aa4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 GRID2O43424 1007 aa4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 XPNPEP2O43895 674 aa4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 PRKRAO75569 313 aaKnown RBP4.38□□□□□ -1.71
SSX2IP-208ENST00000490476 NDUFB10O96000 172 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms